Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF34Q969K3 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.47■□□□□ 0.39
RNF34Q969K3 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.47■□□□□ 0.39
RNF34Q969K3 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.47■□□□□ 0.39
RNF34Q969K3 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.47■□□□□ 0.39
RNF34Q969K3 AC023511.2-201ENST00000618803 211 ntBASIC17.47■□□□□ 0.39
RNF34Q969K3 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
RNF34Q969K3 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RNF34Q969K3 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.47■□□□□ 0.39
RNF34Q969K3 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RNF34Q969K3 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF34Q969K3 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.47■□□□□ 0.39
RNF34Q969K3 PCDHA12-202ENST00000613593 2588 ntBASIC17.47■□□□□ 0.39
RNF34Q969K3 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.47■□□□□ 0.39
RNF34Q969K3 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF34Q969K3 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.47■□□□□ 0.39
RNF34Q969K3 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
RNF34Q969K3 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF34Q969K3 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
RNF34Q969K3 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF34Q969K3 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.47■□□□□ 0.39
RNF34Q969K3 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.46■□□□□ 0.39
RNF34Q969K3 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF34Q969K3 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RNF34Q969K3 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RNF34Q969K3 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
RNF34Q969K3 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.46■□□□□ 0.39
RNF34Q969K3 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF34Q969K3 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RNF34Q969K3 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
RNF34Q969K3 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF34Q969K3 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF34Q969K3 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF34Q969K3 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.46■□□□□ 0.39
RNF34Q969K3 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.46■□□□□ 0.39
RNF34Q969K3 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.46■□□□□ 0.39
RNF34Q969K3 AC092865.5-201ENST00000545435 363 ntBASIC17.46■□□□□ 0.39
RNF34Q969K3 PDPK2P-202ENST00000562415 1191 ntBASIC17.46■□□□□ 0.39
RNF34Q969K3 MIR4492-201ENST00000581627 80 ntBASIC17.46■□□□□ 0.39
RNF34Q969K3 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.46■□□□□ 0.39
RNF34Q969K3 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF34Q969K3 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF34Q969K3 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF34Q969K3 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.46■□□□□ 0.39
RNF34Q969K3 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.46■□□□□ 0.39
RNF34Q969K3 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
RNF34Q969K3 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF34Q969K3 LINC00895-201ENST00000629028 1637 ntBASIC17.46■□□□□ 0.39
RNF34Q969K3 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC17.46■□□□□ 0.39
RNF34Q969K3 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF34Q969K3 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF34Q969K3 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RNF34Q969K3 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF34Q969K3 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
RNF34Q969K3 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
RNF34Q969K3 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
RNF34Q969K3 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.38
RNF34Q969K3 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.45■□□□□ 0.38
RNF34Q969K3 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF34Q969K3 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RNF34Q969K3 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF34Q969K3 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.45■□□□□ 0.38
RNF34Q969K3 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.45■□□□□ 0.38
RNF34Q969K3 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RNF34Q969K3 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF34Q969K3 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RNF34Q969K3 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
RNF34Q969K3 RNF216P1-203ENST00000404404 2427 ntBASIC17.45■□□□□ 0.38
RNF34Q969K3 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF34Q969K3 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
RNF34Q969K3 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF34Q969K3 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF34Q969K3 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
RNF34Q969K3 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF34Q969K3 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF34Q969K3 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF34Q969K3 KRT18P13-201ENST00000400056 1290 ntBASIC17.45■□□□□ 0.38
RNF34Q969K3 HMGA1P7-201ENST00000406908 502 ntBASIC17.45■□□□□ 0.38
RNF34Q969K3 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.45■□□□□ 0.38
RNF34Q969K3 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.45■□□□□ 0.38
RNF34Q969K3 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.45■□□□□ 0.38
RNF34Q969K3 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RNF34Q969K3 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.45■□□□□ 0.38
RNF34Q969K3 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.45■□□□□ 0.38
RNF34Q969K3 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.45■□□□□ 0.38
RNF34Q969K3 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.45■□□□□ 0.38
RNF34Q969K3 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF34Q969K3 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF34Q969K3 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF34Q969K3 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF34Q969K3 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RNF34Q969K3 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.45■□□□□ 0.38
RNF34Q969K3 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF34Q969K3 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RNF34Q969K3 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
RNF34Q969K3 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF34Q969K3 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
RNF34Q969K3 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.45■□□□□ 0.38
RNF34Q969K3 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17.44■□□□□ 0.38
RNF34Q969K3 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms