Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RAPGEF4Q8WZA2 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RAPGEF4Q8WZA2 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC21.69■■□□□ 1.06
RAPGEF4Q8WZA2 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
RAPGEF4Q8WZA2 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RAPGEF4Q8WZA2 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RAPGEF4Q8WZA2 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC21.69■■□□□ 1.06
RAPGEF4Q8WZA2 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
RAPGEF4Q8WZA2 DFFBP1-201ENST00000433250 979 ntBASIC21.69■■□□□ 1.06
RAPGEF4Q8WZA2 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC21.69■■□□□ 1.06
RAPGEF4Q8WZA2 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC21.69■■□□□ 1.06
RAPGEF4Q8WZA2 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RAPGEF4Q8WZA2 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC21.69■■□□□ 1.06
RAPGEF4Q8WZA2 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC21.69■■□□□ 1.06
RAPGEF4Q8WZA2 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC21.69■■□□□ 1.06
RAPGEF4Q8WZA2 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC21.69■■□□□ 1.06
RAPGEF4Q8WZA2 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC21.69■■□□□ 1.06
RAPGEF4Q8WZA2 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RAPGEF4Q8WZA2 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC21.69■■□□□ 1.06
RAPGEF4Q8WZA2 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
RAPGEF4Q8WZA2 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RAPGEF4Q8WZA2 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RAPGEF4Q8WZA2 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RAPGEF4Q8WZA2 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC21.69■■□□□ 1.06
RAPGEF4Q8WZA2 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
RAPGEF4Q8WZA2 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
RAPGEF4Q8WZA2 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RAPGEF4Q8WZA2 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
RAPGEF4Q8WZA2 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
RAPGEF4Q8WZA2 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
RAPGEF4Q8WZA2 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RAPGEF4Q8WZA2 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC21.68■■□□□ 1.06
RAPGEF4Q8WZA2 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
RAPGEF4Q8WZA2 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
RAPGEF4Q8WZA2 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC21.68■■□□□ 1.06
RAPGEF4Q8WZA2 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC21.68■■□□□ 1.06
RAPGEF4Q8WZA2 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RAPGEF4Q8WZA2 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
RAPGEF4Q8WZA2 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RAPGEF4Q8WZA2 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RAPGEF4Q8WZA2 AC098614.1-201ENST00000368528 745 ntBASIC21.68■■□□□ 1.06
RAPGEF4Q8WZA2 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
RAPGEF4Q8WZA2 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC21.68■■□□□ 1.06
RAPGEF4Q8WZA2 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC21.68■■□□□ 1.06
RAPGEF4Q8WZA2 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC21.68■■□□□ 1.06
RAPGEF4Q8WZA2 AC093724.1-201ENST00000448659 1027 ntBASIC21.68■■□□□ 1.06
RAPGEF4Q8WZA2 AL512361.1-201ENST00000554200 418 ntBASIC21.68■■□□□ 1.06
RAPGEF4Q8WZA2 AC010336.2-201ENST00000564226 506 ntBASIC21.68■■□□□ 1.06
RAPGEF4Q8WZA2 NAA38-207ENST00000576861 556 ntTSL 3 BASIC21.68■■□□□ 1.06
RAPGEF4Q8WZA2 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC21.68■■□□□ 1.06
RAPGEF4Q8WZA2 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC21.68■■□□□ 1.06
RAPGEF4Q8WZA2 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RAPGEF4Q8WZA2 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC21.68■■□□□ 1.06
RAPGEF4Q8WZA2 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RAPGEF4Q8WZA2 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC21.68■■□□□ 1.06
RAPGEF4Q8WZA2 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RAPGEF4Q8WZA2 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RAPGEF4Q8WZA2 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RAPGEF4Q8WZA2 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RAPGEF4Q8WZA2 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RAPGEF4Q8WZA2 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
RAPGEF4Q8WZA2 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RAPGEF4Q8WZA2 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RAPGEF4Q8WZA2 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
RAPGEF4Q8WZA2 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC21.67■■□□□ 1.06
RAPGEF4Q8WZA2 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RAPGEF4Q8WZA2 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
RAPGEF4Q8WZA2 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RAPGEF4Q8WZA2 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
RAPGEF4Q8WZA2 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC21.67■■□□□ 1.06
RAPGEF4Q8WZA2 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
RAPGEF4Q8WZA2 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC21.67■■□□□ 1.06
RAPGEF4Q8WZA2 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC21.67■■□□□ 1.06
RAPGEF4Q8WZA2 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC21.67■■□□□ 1.06
RAPGEF4Q8WZA2 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RAPGEF4Q8WZA2 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
RAPGEF4Q8WZA2 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RAPGEF4Q8WZA2 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC21.67■■□□□ 1.06
RAPGEF4Q8WZA2 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC21.67■■□□□ 1.06
RAPGEF4Q8WZA2 AC024267.1-201ENST00000582320 895 ntBASIC21.67■■□□□ 1.06
RAPGEF4Q8WZA2 AL139011.1-202ENST00000642063 584 ntBASIC21.67■■□□□ 1.06
RAPGEF4Q8WZA2 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RAPGEF4Q8WZA2 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RAPGEF4Q8WZA2 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RAPGEF4Q8WZA2 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RAPGEF4Q8WZA2 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RAPGEF4Q8WZA2 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RAPGEF4Q8WZA2 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RAPGEF4Q8WZA2 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC21.66■■□□□ 1.06
RAPGEF4Q8WZA2 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC21.66■■□□□ 1.06
RAPGEF4Q8WZA2 AL391825.1-201ENST00000457671 1364 ntBASIC21.66■■□□□ 1.06
RAPGEF4Q8WZA2 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RAPGEF4Q8WZA2 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RAPGEF4Q8WZA2 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
RAPGEF4Q8WZA2 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RAPGEF4Q8WZA2 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RAPGEF4Q8WZA2 AC087499.6-201ENST00000411576 835 ntBASIC21.66■■□□□ 1.06
RAPGEF4Q8WZA2 U91328.1-201ENST00000437528 223 ntBASIC21.66■■□□□ 1.06
RAPGEF4Q8WZA2 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC21.66■■□□□ 1.06
RAPGEF4Q8WZA2 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms