Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
LMO3Q8TAP4 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.83■□□□□ 0.44
LMO3Q8TAP4 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.83■□□□□ 0.44
LMO3Q8TAP4 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.83■□□□□ 0.44
LMO3Q8TAP4 REXO1L8P-201ENST00000604378 1897 ntBASIC17.83■□□□□ 0.44
LMO3Q8TAP4 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LMO3Q8TAP4 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LMO3Q8TAP4 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
LMO3Q8TAP4 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LMO3Q8TAP4 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.83■□□□□ 0.44
LMO3Q8TAP4 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.83■□□□□ 0.44
LMO3Q8TAP4 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LMO3Q8TAP4 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LMO3Q8TAP4 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LMO3Q8TAP4 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.83■□□□□ 0.44
LMO3Q8TAP4 PCDHA1-201ENST00000378133 2726 ntBASIC17.83■□□□□ 0.44
LMO3Q8TAP4 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
LMO3Q8TAP4 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
LMO3Q8TAP4 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LMO3Q8TAP4 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.82■□□□□ 0.44
LMO3Q8TAP4 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
LMO3Q8TAP4 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LMO3Q8TAP4 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LMO3Q8TAP4 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LMO3Q8TAP4 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LMO3Q8TAP4 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.82■□□□□ 0.44
LMO3Q8TAP4 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LMO3Q8TAP4 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LMO3Q8TAP4 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LMO3Q8TAP4 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
LMO3Q8TAP4 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.82■□□□□ 0.44
LMO3Q8TAP4 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.82■□□□□ 0.44
LMO3Q8TAP4 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LMO3Q8TAP4 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
LMO3Q8TAP4 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
LMO3Q8TAP4 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.82■□□□□ 0.44
LMO3Q8TAP4 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.82■□□□□ 0.44
LMO3Q8TAP4 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.82■□□□□ 0.44
LMO3Q8TAP4 PDPK2P-202ENST00000562415 1191 ntBASIC17.82■□□□□ 0.44
LMO3Q8TAP4 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.82■□□□□ 0.44
LMO3Q8TAP4 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.82■□□□□ 0.44
LMO3Q8TAP4 AC027601.4-201ENST00000611259 610 ntBASIC17.82■□□□□ 0.44
LMO3Q8TAP4 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.82■□□□□ 0.44
LMO3Q8TAP4 FAM197Y3-203ENST00000618346 717 ntBASIC17.82■□□□□ 0.44
LMO3Q8TAP4 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
LMO3Q8TAP4 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LMO3Q8TAP4 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.82■□□□□ 0.44
LMO3Q8TAP4 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.82■□□□□ 0.44
LMO3Q8TAP4 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LMO3Q8TAP4 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LMO3Q8TAP4 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.81■□□□□ 0.44
LMO3Q8TAP4 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
LMO3Q8TAP4 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LMO3Q8TAP4 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LMO3Q8TAP4 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.81■□□□□ 0.44
LMO3Q8TAP4 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LMO3Q8TAP4 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.81■□□□□ 0.44
LMO3Q8TAP4 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LMO3Q8TAP4 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
LMO3Q8TAP4 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
LMO3Q8TAP4 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LMO3Q8TAP4 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.81■□□□□ 0.44
LMO3Q8TAP4 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.81■□□□□ 0.44
LMO3Q8TAP4 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.81■□□□□ 0.44
LMO3Q8TAP4 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.81■□□□□ 0.44
LMO3Q8TAP4 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.81■□□□□ 0.44
LMO3Q8TAP4 AL591424.1-201ENST00000442569 1213 ntBASIC17.81■□□□□ 0.44
LMO3Q8TAP4 KRT18P3-201ENST00000451602 1288 ntBASIC17.81■□□□□ 0.44
LMO3Q8TAP4 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.81■□□□□ 0.44
LMO3Q8TAP4 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.81■□□□□ 0.44
LMO3Q8TAP4 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LMO3Q8TAP4 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.81■□□□□ 0.44
LMO3Q8TAP4 AP002472.1-201ENST00000577490 586 ntBASIC17.81■□□□□ 0.44
LMO3Q8TAP4 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LMO3Q8TAP4 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.81■□□□□ 0.44
LMO3Q8TAP4 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LMO3Q8TAP4 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
LMO3Q8TAP4 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.81■□□□□ 0.44
LMO3Q8TAP4 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
LMO3Q8TAP4 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
LMO3Q8TAP4 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
LMO3Q8TAP4 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LMO3Q8TAP4 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LMO3Q8TAP4 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
LMO3Q8TAP4 AC006449.6-201ENST00000612330 2296 ntBASIC17.81■□□□□ 0.44
LMO3Q8TAP4 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LMO3Q8TAP4 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
LMO3Q8TAP4 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.8■□□□□ 0.44
LMO3Q8TAP4 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.8■□□□□ 0.44
LMO3Q8TAP4 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LMO3Q8TAP4 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
LMO3Q8TAP4 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LMO3Q8TAP4 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LMO3Q8TAP4 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LMO3Q8TAP4 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LMO3Q8TAP4 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LMO3Q8TAP4 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LMO3Q8TAP4 AC074386.1-202ENST00000463561 864 ntBASIC17.8■□□□□ 0.44
LMO3Q8TAP4 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.8■□□□□ 0.44
LMO3Q8TAP4 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms