Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.19■□□□□ 0.5
KLHDC9Q8NEP7 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
KLHDC9Q8NEP7 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KLHDC9Q8NEP7 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KLHDC9Q8NEP7 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KLHDC9Q8NEP7 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
KLHDC9Q8NEP7 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KLHDC9Q8NEP7 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
KLHDC9Q8NEP7 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
KLHDC9Q8NEP7 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
KLHDC9Q8NEP7 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
KLHDC9Q8NEP7 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KLHDC9Q8NEP7 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
KLHDC9Q8NEP7 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC18.19■□□□□ 0.5
KLHDC9Q8NEP7 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC18.19■□□□□ 0.5
KLHDC9Q8NEP7 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
KLHDC9Q8NEP7 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KLHDC9Q8NEP7 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC18.19■□□□□ 0.5
KLHDC9Q8NEP7 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
KLHDC9Q8NEP7 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
KLHDC9Q8NEP7 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC18.19■□□□□ 0.5
KLHDC9Q8NEP7 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KLHDC9Q8NEP7 AC092068.3-201ENST00000587894 2016 ntBASIC18.19■□□□□ 0.5
KLHDC9Q8NEP7 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC18.19■□□□□ 0.5
KLHDC9Q8NEP7 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
KLHDC9Q8NEP7 AC020765.3-201ENST00000613051 740 ntBASIC18.19■□□□□ 0.5
KLHDC9Q8NEP7 MIR6069-201ENST00000620069 79 ntBASIC18.19■□□□□ 0.5
KLHDC9Q8NEP7 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.19■□□□□ 0.5
KLHDC9Q8NEP7 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC18.19■□□□□ 0.5
KLHDC9Q8NEP7 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC18.19■□□□□ 0.5
KLHDC9Q8NEP7 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC18.19■□□□□ 0.5
KLHDC9Q8NEP7 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
KLHDC9Q8NEP7 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KLHDC9Q8NEP7 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KLHDC9Q8NEP7 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.18■□□□□ 0.5
KLHDC9Q8NEP7 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
KLHDC9Q8NEP7 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KLHDC9Q8NEP7 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.18■□□□□ 0.5
KLHDC9Q8NEP7 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
KLHDC9Q8NEP7 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC18.18■□□□□ 0.5
KLHDC9Q8NEP7 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
KLHDC9Q8NEP7 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
KLHDC9Q8NEP7 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
KLHDC9Q8NEP7 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
KLHDC9Q8NEP7 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KLHDC9Q8NEP7 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KLHDC9Q8NEP7 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KLHDC9Q8NEP7 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
KLHDC9Q8NEP7 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KLHDC9Q8NEP7 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KLHDC9Q8NEP7 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.18■□□□□ 0.5
KLHDC9Q8NEP7 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
KLHDC9Q8NEP7 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
KLHDC9Q8NEP7 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
KLHDC9Q8NEP7 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
KLHDC9Q8NEP7 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC18.18■□□□□ 0.5
KLHDC9Q8NEP7 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
KLHDC9Q8NEP7 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC18.18■□□□□ 0.5
KLHDC9Q8NEP7 AC119751.2-201ENST00000504529 210 ntBASIC18.18■□□□□ 0.5
KLHDC9Q8NEP7 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC18.18■□□□□ 0.5
KLHDC9Q8NEP7 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC18.18■□□□□ 0.5
KLHDC9Q8NEP7 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
KLHDC9Q8NEP7 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC18.18■□□□□ 0.5
KLHDC9Q8NEP7 AC092337.1-201ENST00000568699 1129 ntBASIC18.18■□□□□ 0.5
KLHDC9Q8NEP7 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC18.18■□□□□ 0.5
KLHDC9Q8NEP7 AC093726.1-201ENST00000608064 963 ntBASIC18.18■□□□□ 0.5
KLHDC9Q8NEP7 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
KLHDC9Q8NEP7 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
KLHDC9Q8NEP7 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
KLHDC9Q8NEP7 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
KLHDC9Q8NEP7 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KLHDC9Q8NEP7 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
KLHDC9Q8NEP7 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
KLHDC9Q8NEP7 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KLHDC9Q8NEP7 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KLHDC9Q8NEP7 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.18■□□□□ 0.5
KLHDC9Q8NEP7 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KLHDC9Q8NEP7 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.18■□□□□ 0.5
KLHDC9Q8NEP7 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.18■□□□□ 0.5
KLHDC9Q8NEP7 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.18■□□□□ 0.5
KLHDC9Q8NEP7 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.18■□□□□ 0.5
KLHDC9Q8NEP7 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
KLHDC9Q8NEP7 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
KLHDC9Q8NEP7 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KLHDC9Q8NEP7 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
KLHDC9Q8NEP7 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC18.17■□□□□ 0.5
KLHDC9Q8NEP7 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
KLHDC9Q8NEP7 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC18.17■□□□□ 0.5
KLHDC9Q8NEP7 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
KLHDC9Q8NEP7 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KLHDC9Q8NEP7 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.17■□□□□ 0.5
KLHDC9Q8NEP7 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
KLHDC9Q8NEP7 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KLHDC9Q8NEP7 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
KLHDC9Q8NEP7 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
KLHDC9Q8NEP7 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC18.17■□□□□ 0.5
KLHDC9Q8NEP7 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC18.17■□□□□ 0.5
KLHDC9Q8NEP7 FADS2-205ENST00000517839 469 ntTSL 3 BASIC18.17■□□□□ 0.5
KLHDC9Q8NEP7 NEU3-203ENST00000529024 581 ntTSL 3 BASIC18.17■□□□□ 0.5
KLHDC9Q8NEP7 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms