Protein–RNA interactions for Protein: Q8NDX1

PSD4, PH and SEC7 domain-containing protein 4, humanhuman

Predictions only

Length 1,056 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSD4Q8NDX1 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PSD4Q8NDX1 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.84■□□□□ 0.13
PSD4Q8NDX1 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.84■□□□□ 0.13
PSD4Q8NDX1 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
PSD4Q8NDX1 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PSD4Q8NDX1 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.84■□□□□ 0.13
PSD4Q8NDX1 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.84■□□□□ 0.13
PSD4Q8NDX1 AC007967.2-201ENST00000432613 625 ntBASIC15.84■□□□□ 0.13
PSD4Q8NDX1 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.84■□□□□ 0.13
PSD4Q8NDX1 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.84■□□□□ 0.13
PSD4Q8NDX1 AC108073.2-201ENST00000464002 357 ntBASIC15.84■□□□□ 0.13
PSD4Q8NDX1 RNA5SP416-201ENST00000516838 111 ntBASIC15.84■□□□□ 0.13
PSD4Q8NDX1 IGHV3-65-201ENST00000523210 341 ntBASIC15.84■□□□□ 0.13
PSD4Q8NDX1 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.84■□□□□ 0.13
PSD4Q8NDX1 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.84■□□□□ 0.13
PSD4Q8NDX1 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.84■□□□□ 0.13
PSD4Q8NDX1 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.84■□□□□ 0.13
PSD4Q8NDX1 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.84■□□□□ 0.13
PSD4Q8NDX1 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
PSD4Q8NDX1 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.84■□□□□ 0.13
PSD4Q8NDX1 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.84■□□□□ 0.13
PSD4Q8NDX1 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PSD4Q8NDX1 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PSD4Q8NDX1 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.84■□□□□ 0.13
PSD4Q8NDX1 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.84■□□□□ 0.13
PSD4Q8NDX1 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PSD4Q8NDX1 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.84■□□□□ 0.13
PSD4Q8NDX1 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PSD4Q8NDX1 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.84■□□□□ 0.13
PSD4Q8NDX1 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
PSD4Q8NDX1 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
PSD4Q8NDX1 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PSD4Q8NDX1 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PSD4Q8NDX1 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PSD4Q8NDX1 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.84■□□□□ 0.13
PSD4Q8NDX1 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.83■□□□□ 0.13
PSD4Q8NDX1 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.13
PSD4Q8NDX1 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
PSD4Q8NDX1 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
PSD4Q8NDX1 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
PSD4Q8NDX1 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
PSD4Q8NDX1 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
PSD4Q8NDX1 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
PSD4Q8NDX1 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.13
PSD4Q8NDX1 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PSD4Q8NDX1 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
PSD4Q8NDX1 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PSD4Q8NDX1 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PSD4Q8NDX1 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.83■□□□□ 0.12
PSD4Q8NDX1 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
PSD4Q8NDX1 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.83■□□□□ 0.12
PSD4Q8NDX1 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
PSD4Q8NDX1 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
PSD4Q8NDX1 PGAM5P1-201ENST00000518923 814 ntBASIC15.83■□□□□ 0.12
PSD4Q8NDX1 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.83■□□□□ 0.12
PSD4Q8NDX1 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.83■□□□□ 0.12
PSD4Q8NDX1 MIR4751-201ENST00000578027 74 ntBASIC15.83■□□□□ 0.12
PSD4Q8NDX1 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.83■□□□□ 0.12
PSD4Q8NDX1 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.83■□□□□ 0.12
PSD4Q8NDX1 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
PSD4Q8NDX1 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PSD4Q8NDX1 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PSD4Q8NDX1 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.83■□□□□ 0.12
PSD4Q8NDX1 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PSD4Q8NDX1 LYSMD4-203ENST00000378904 2122 ntBASIC15.83■□□□□ 0.12
PSD4Q8NDX1 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PSD4Q8NDX1 AC023824.1-201ENST00000562945 2975 ntBASIC15.83■□□□□ 0.12
PSD4Q8NDX1 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.83■□□□□ 0.12
PSD4Q8NDX1 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.83■□□□□ 0.12
PSD4Q8NDX1 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PSD4Q8NDX1 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
PSD4Q8NDX1 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.82■□□□□ 0.12
PSD4Q8NDX1 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PSD4Q8NDX1 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
PSD4Q8NDX1 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PSD4Q8NDX1 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PSD4Q8NDX1 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PSD4Q8NDX1 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PSD4Q8NDX1 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
PSD4Q8NDX1 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PSD4Q8NDX1 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PSD4Q8NDX1 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.82■□□□□ 0.12
PSD4Q8NDX1 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
PSD4Q8NDX1 AP002414.1-201ENST00000391405 1147 ntBASIC15.82■□□□□ 0.12
PSD4Q8NDX1 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PSD4Q8NDX1 KRT18P13-201ENST00000400056 1290 ntBASIC15.82■□□□□ 0.12
PSD4Q8NDX1 PTCHD3P3-201ENST00000403073 906 ntBASIC15.82■□□□□ 0.12
PSD4Q8NDX1 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PSD4Q8NDX1 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
PSD4Q8NDX1 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.82■□□□□ 0.12
PSD4Q8NDX1 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.82■□□□□ 0.12
PSD4Q8NDX1 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.82■□□□□ 0.12
PSD4Q8NDX1 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.82■□□□□ 0.12
PSD4Q8NDX1 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
PSD4Q8NDX1 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.82■□□□□ 0.12
PSD4Q8NDX1 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.82■□□□□ 0.12
PSD4Q8NDX1 AC064836.3-201ENST00000607928 673 ntBASIC15.82■□□□□ 0.12
PSD4Q8NDX1 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
PSD4Q8NDX1 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
PSD4Q8NDX1 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms