Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 FAM58DP-201ENST00000428076 619 ntBASIC17.57■□□□□ 0.4
SCN4BQ8IWT1 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.57■□□□□ 0.4
SCN4BQ8IWT1 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.57■□□□□ 0.4
SCN4BQ8IWT1 AP002490.2-201ENST00000524791 560 ntBASIC17.57■□□□□ 0.4
SCN4BQ8IWT1 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SCN4BQ8IWT1 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.57■□□□□ 0.4
SCN4BQ8IWT1 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.57■□□□□ 0.4
SCN4BQ8IWT1 AC027307.2-201ENST00000591252 911 ntBASIC17.57■□□□□ 0.4
SCN4BQ8IWT1 AL355385.1-201ENST00000606123 409 ntBASIC17.57■□□□□ 0.4
SCN4BQ8IWT1 AC009093.7-201ENST00000623853 1223 ntBASIC17.57■□□□□ 0.4
SCN4BQ8IWT1 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.57■□□□□ 0.4
SCN4BQ8IWT1 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.57■□□□□ 0.4
SCN4BQ8IWT1 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SCN4BQ8IWT1 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.57■□□□□ 0.4
SCN4BQ8IWT1 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
SCN4BQ8IWT1 AL645728.1-201ENST00000366221 2101 ntBASIC17.57■□□□□ 0.4
SCN4BQ8IWT1 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SCN4BQ8IWT1 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
SCN4BQ8IWT1 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SCN4BQ8IWT1 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.57■□□□□ 0.4
SCN4BQ8IWT1 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SCN4BQ8IWT1 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SCN4BQ8IWT1 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.57■□□□□ 0.4
SCN4BQ8IWT1 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SCN4BQ8IWT1 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.57■□□□□ 0.4
SCN4BQ8IWT1 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.56■□□□□ 0.4
SCN4BQ8IWT1 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCN4BQ8IWT1 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCN4BQ8IWT1 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCN4BQ8IWT1 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SCN4BQ8IWT1 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
SCN4BQ8IWT1 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.56■□□□□ 0.4
SCN4BQ8IWT1 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCN4BQ8IWT1 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCN4BQ8IWT1 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCN4BQ8IWT1 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCN4BQ8IWT1 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SCN4BQ8IWT1 AC005915.1-201ENST00000624912 2018 ntBASIC17.56■□□□□ 0.4
SCN4BQ8IWT1 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SCN4BQ8IWT1 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SCN4BQ8IWT1 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
SCN4BQ8IWT1 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCN4BQ8IWT1 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.56■□□□□ 0.4
SCN4BQ8IWT1 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.56■□□□□ 0.4
SCN4BQ8IWT1 KRT18P34-201ENST00000488218 1270 ntBASIC17.56■□□□□ 0.4
SCN4BQ8IWT1 HLA-J-203ENST00000494367 1087 ntBASIC17.56■□□□□ 0.4
SCN4BQ8IWT1 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCN4BQ8IWT1 RFPL4AP1-201ENST00000530883 850 ntBASIC17.56■□□□□ 0.4
SCN4BQ8IWT1 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SCN4BQ8IWT1 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.56■□□□□ 0.4
SCN4BQ8IWT1 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.56■□□□□ 0.4
SCN4BQ8IWT1 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.56■□□□□ 0.4
SCN4BQ8IWT1 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCN4BQ8IWT1 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SCN4BQ8IWT1 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCN4BQ8IWT1 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SCN4BQ8IWT1 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SCN4BQ8IWT1 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
SCN4BQ8IWT1 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SCN4BQ8IWT1 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SCN4BQ8IWT1 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SCN4BQ8IWT1 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.56■□□□□ 0.4
SCN4BQ8IWT1 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCN4BQ8IWT1 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCN4BQ8IWT1 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
SCN4BQ8IWT1 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCN4BQ8IWT1 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
SCN4BQ8IWT1 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCN4BQ8IWT1 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.56■□□□□ 0.4
SCN4BQ8IWT1 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SCN4BQ8IWT1 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SCN4BQ8IWT1 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.56■□□□□ 0.4
SCN4BQ8IWT1 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SCN4BQ8IWT1 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SCN4BQ8IWT1 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SCN4BQ8IWT1 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SCN4BQ8IWT1 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SCN4BQ8IWT1 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SCN4BQ8IWT1 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SCN4BQ8IWT1 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SCN4BQ8IWT1 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.55■□□□□ 0.4
SCN4BQ8IWT1 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SCN4BQ8IWT1 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SCN4BQ8IWT1 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SCN4BQ8IWT1 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SCN4BQ8IWT1 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SCN4BQ8IWT1 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
SCN4BQ8IWT1 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.55■□□□□ 0.4
SCN4BQ8IWT1 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
SCN4BQ8IWT1 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
SCN4BQ8IWT1 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SCN4BQ8IWT1 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
SCN4BQ8IWT1 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.55■□□□□ 0.4
SCN4BQ8IWT1 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SCN4BQ8IWT1 RBPMS2P1-201ENST00000437762 623 ntBASIC17.55■□□□□ 0.4
SCN4BQ8IWT1 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SCN4BQ8IWT1 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.55■□□□□ 0.4
SCN4BQ8IWT1 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.55■□□□□ 0.4
SCN4BQ8IWT1 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
SCN4BQ8IWT1 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms