Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.19■□□□□ 0.02
CROCCP3Q8IVE0 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CROCCP3Q8IVE0 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CROCCP3Q8IVE0 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CROCCP3Q8IVE0 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CROCCP3Q8IVE0 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CROCCP3Q8IVE0 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CROCCP3Q8IVE0 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
CROCCP3Q8IVE0 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CROCCP3Q8IVE0 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.18■□□□□ 0.02
CROCCP3Q8IVE0 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CROCCP3Q8IVE0 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CROCCP3Q8IVE0 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CROCCP3Q8IVE0 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CROCCP3Q8IVE0 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CROCCP3Q8IVE0 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CROCCP3Q8IVE0 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.18■□□□□ 0.02
CROCCP3Q8IVE0 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
CROCCP3Q8IVE0 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
CROCCP3Q8IVE0 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CROCCP3Q8IVE0 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CROCCP3Q8IVE0 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CROCCP3Q8IVE0 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CROCCP3Q8IVE0 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CROCCP3Q8IVE0 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CROCCP3Q8IVE0 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC15.18■□□□□ 0.02
CROCCP3Q8IVE0 FAM197Y1-201ENST00000421178 764 ntBASIC15.18■□□□□ 0.02
CROCCP3Q8IVE0 PVRIG2P-201ENST00000435460 978 ntBASIC15.18■□□□□ 0.02
CROCCP3Q8IVE0 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC15.18■□□□□ 0.02
CROCCP3Q8IVE0 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC15.18■□□□□ 0.02
CROCCP3Q8IVE0 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CROCCP3Q8IVE0 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC15.18■□□□□ 0.02
CROCCP3Q8IVE0 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC15.18■□□□□ 0.02
CROCCP3Q8IVE0 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC15.18■□□□□ 0.02
CROCCP3Q8IVE0 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.18■□□□□ 0.02
CROCCP3Q8IVE0 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
CROCCP3Q8IVE0 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.18■□□□□ 0.02
CROCCP3Q8IVE0 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CROCCP3Q8IVE0 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CROCCP3Q8IVE0 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CROCCP3Q8IVE0 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC15.18■□□□□ 0.02
CROCCP3Q8IVE0 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CROCCP3Q8IVE0 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CROCCP3Q8IVE0 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CROCCP3Q8IVE0 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CROCCP3Q8IVE0 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
CROCCP3Q8IVE0 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CROCCP3Q8IVE0 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.18■□□□□ 0.02
CROCCP3Q8IVE0 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.18■□□□□ 0.02
CROCCP3Q8IVE0 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.18■□□□□ 0.02
CROCCP3Q8IVE0 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CROCCP3Q8IVE0 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CROCCP3Q8IVE0 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CROCCP3Q8IVE0 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CROCCP3Q8IVE0 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CROCCP3Q8IVE0 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CROCCP3Q8IVE0 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CROCCP3Q8IVE0 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CROCCP3Q8IVE0 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CROCCP3Q8IVE0 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CROCCP3Q8IVE0 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CROCCP3Q8IVE0 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CROCCP3Q8IVE0 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.17■□□□□ 0.02
CROCCP3Q8IVE0 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CROCCP3Q8IVE0 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.17■□□□□ 0.02
CROCCP3Q8IVE0 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CROCCP3Q8IVE0 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CROCCP3Q8IVE0 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.17■□□□□ 0.02
CROCCP3Q8IVE0 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CROCCP3Q8IVE0 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.17■□□□□ 0.02
CROCCP3Q8IVE0 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CROCCP3Q8IVE0 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CROCCP3Q8IVE0 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CROCCP3Q8IVE0 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CROCCP3Q8IVE0 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CROCCP3Q8IVE0 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CROCCP3Q8IVE0 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CROCCP3Q8IVE0 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.17■□□□□ 0.02
CROCCP3Q8IVE0 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.17■□□□□ 0.02
CROCCP3Q8IVE0 PBK-203ENST00000522944 1499 ntTSL 2 BASIC15.17■□□□□ 0.02
CROCCP3Q8IVE0 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CROCCP3Q8IVE0 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CROCCP3Q8IVE0 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
CROCCP3Q8IVE0 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CROCCP3Q8IVE0 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CROCCP3Q8IVE0 NUDT16P1-203ENST00000513809 620 ntBASIC15.17■□□□□ 0.02
CROCCP3Q8IVE0 BX088651.1-201ENST00000540551 451 ntBASIC15.17■□□□□ 0.02
CROCCP3Q8IVE0 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC15.17■□□□□ 0.02
CROCCP3Q8IVE0 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CROCCP3Q8IVE0 AP005242.2-201ENST00000580065 1175 ntBASIC15.17■□□□□ 0.02
CROCCP3Q8IVE0 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CROCCP3Q8IVE0 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC15.17■□□□□ 0.02
CROCCP3Q8IVE0 CD177P1-201ENST00000606252 935 ntBASIC15.17■□□□□ 0.02
CROCCP3Q8IVE0 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CROCCP3Q8IVE0 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
CROCCP3Q8IVE0 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CROCCP3Q8IVE0 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CROCCP3Q8IVE0 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.17■□□□□ 0.02
CROCCP3Q8IVE0 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC15.17■□□□□ 0.02
CROCCP3Q8IVE0 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms