Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LDB1Q86U70 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LDB1Q86U70 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.67■□□□□ 0.26
LDB1Q86U70 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
LDB1Q86U70 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LDB1Q86U70 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LDB1Q86U70 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LDB1Q86U70 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LDB1Q86U70 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.67■□□□□ 0.26
LDB1Q86U70 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LDB1Q86U70 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
LDB1Q86U70 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
LDB1Q86U70 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LDB1Q86U70 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.67■□□□□ 0.26
LDB1Q86U70 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LDB1Q86U70 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LDB1Q86U70 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.67■□□□□ 0.26
LDB1Q86U70 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.67■□□□□ 0.26
LDB1Q86U70 AC010654.1-201ENST00000615722 808 ntBASIC16.67■□□□□ 0.26
LDB1Q86U70 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.67■□□□□ 0.26
LDB1Q86U70 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.67■□□□□ 0.26
LDB1Q86U70 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
LDB1Q86U70 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
LDB1Q86U70 KRT8P39-201ENST00000396270 1433 ntBASIC16.67■□□□□ 0.26
LDB1Q86U70 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
LDB1Q86U70 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
LDB1Q86U70 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.67■□□□□ 0.26
LDB1Q86U70 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.67■□□□□ 0.26
LDB1Q86U70 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LDB1Q86U70 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
LDB1Q86U70 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LDB1Q86U70 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
LDB1Q86U70 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
LDB1Q86U70 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LDB1Q86U70 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
LDB1Q86U70 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LDB1Q86U70 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LDB1Q86U70 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
LDB1Q86U70 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.67■□□□□ 0.26
LDB1Q86U70 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LDB1Q86U70 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.67■□□□□ 0.26
LDB1Q86U70 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LDB1Q86U70 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LDB1Q86U70 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
LDB1Q86U70 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LDB1Q86U70 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
LDB1Q86U70 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LDB1Q86U70 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LDB1Q86U70 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LDB1Q86U70 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LDB1Q86U70 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LDB1Q86U70 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.66■□□□□ 0.26
LDB1Q86U70 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LDB1Q86U70 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LDB1Q86U70 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LDB1Q86U70 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LDB1Q86U70 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LDB1Q86U70 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.66■□□□□ 0.26
LDB1Q86U70 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.66■□□□□ 0.26
LDB1Q86U70 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
LDB1Q86U70 IGLL3P-201ENST00000412472 434 ntBASIC16.66■□□□□ 0.26
LDB1Q86U70 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
LDB1Q86U70 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
LDB1Q86U70 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
LDB1Q86U70 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.66■□□□□ 0.26
LDB1Q86U70 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.66■□□□□ 0.26
LDB1Q86U70 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
LDB1Q86U70 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.66■□□□□ 0.26
LDB1Q86U70 AC005412.3-201ENST00000580309 715 ntBASIC16.66■□□□□ 0.26
LDB1Q86U70 AL139011.1-202ENST00000642063 584 ntBASIC16.66■□□□□ 0.26
LDB1Q86U70 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LDB1Q86U70 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LDB1Q86U70 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LDB1Q86U70 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
LDB1Q86U70 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LDB1Q86U70 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LDB1Q86U70 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LDB1Q86U70 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.66■□□□□ 0.26
LDB1Q86U70 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LDB1Q86U70 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LDB1Q86U70 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.66■□□□□ 0.26
LDB1Q86U70 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LDB1Q86U70 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LDB1Q86U70 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LDB1Q86U70 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LDB1Q86U70 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
LDB1Q86U70 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
LDB1Q86U70 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LDB1Q86U70 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.65■□□□□ 0.26
LDB1Q86U70 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.65■□□□□ 0.26
LDB1Q86U70 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.65■□□□□ 0.26
LDB1Q86U70 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LDB1Q86U70 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.65■□□□□ 0.26
LDB1Q86U70 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
LDB1Q86U70 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.65■□□□□ 0.26
LDB1Q86U70 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LDB1Q86U70 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.65■□□□□ 0.26
LDB1Q86U70 GGT4P-201ENST00000623672 1708 ntBASIC16.65■□□□□ 0.26
LDB1Q86U70 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
LDB1Q86U70 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms