Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LYSMD3Q7Z3D4 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LYSMD3Q7Z3D4 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LYSMD3Q7Z3D4 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
LYSMD3Q7Z3D4 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LYSMD3Q7Z3D4 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LYSMD3Q7Z3D4 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
LYSMD3Q7Z3D4 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.78■□□□□ 0.28
LYSMD3Q7Z3D4 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
LYSMD3Q7Z3D4 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
LYSMD3Q7Z3D4 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
LYSMD3Q7Z3D4 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LYSMD3Q7Z3D4 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LYSMD3Q7Z3D4 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
LYSMD3Q7Z3D4 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.78■□□□□ 0.28
LYSMD3Q7Z3D4 AC092865.5-201ENST00000545435 363 ntBASIC16.78■□□□□ 0.28
LYSMD3Q7Z3D4 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.78■□□□□ 0.28
LYSMD3Q7Z3D4 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LYSMD3Q7Z3D4 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.78■□□□□ 0.28
LYSMD3Q7Z3D4 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
LYSMD3Q7Z3D4 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.78■□□□□ 0.28
LYSMD3Q7Z3D4 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.78■□□□□ 0.28
LYSMD3Q7Z3D4 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LYSMD3Q7Z3D4 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LYSMD3Q7Z3D4 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.78■□□□□ 0.28
LYSMD3Q7Z3D4 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LYSMD3Q7Z3D4 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LYSMD3Q7Z3D4 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.78■□□□□ 0.28
LYSMD3Q7Z3D4 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
LYSMD3Q7Z3D4 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.78■□□□□ 0.28
LYSMD3Q7Z3D4 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
LYSMD3Q7Z3D4 AC092919.2-201ENST00000623631 1645 ntBASIC16.78■□□□□ 0.28
LYSMD3Q7Z3D4 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.77■□□□□ 0.28
LYSMD3Q7Z3D4 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LYSMD3Q7Z3D4 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.77■□□□□ 0.28
LYSMD3Q7Z3D4 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LYSMD3Q7Z3D4 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
LYSMD3Q7Z3D4 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.77■□□□□ 0.28
LYSMD3Q7Z3D4 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LYSMD3Q7Z3D4 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LYSMD3Q7Z3D4 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LYSMD3Q7Z3D4 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
LYSMD3Q7Z3D4 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LYSMD3Q7Z3D4 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.77■□□□□ 0.28
LYSMD3Q7Z3D4 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
LYSMD3Q7Z3D4 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.77■□□□□ 0.28
LYSMD3Q7Z3D4 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.77■□□□□ 0.28
LYSMD3Q7Z3D4 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LYSMD3Q7Z3D4 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.77■□□□□ 0.28
LYSMD3Q7Z3D4 AC002347.1-201ENST00000569543 541 ntBASIC16.77■□□□□ 0.28
LYSMD3Q7Z3D4 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
LYSMD3Q7Z3D4 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LYSMD3Q7Z3D4 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LYSMD3Q7Z3D4 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
LYSMD3Q7Z3D4 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LYSMD3Q7Z3D4 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.77■□□□□ 0.28
LYSMD3Q7Z3D4 HLA-A-202ENST00000376806 1854 ntBASIC16.77■□□□□ 0.27
LYSMD3Q7Z3D4 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
LYSMD3Q7Z3D4 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
LYSMD3Q7Z3D4 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
LYSMD3Q7Z3D4 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
LYSMD3Q7Z3D4 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.77■□□□□ 0.27
LYSMD3Q7Z3D4 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LYSMD3Q7Z3D4 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
LYSMD3Q7Z3D4 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LYSMD3Q7Z3D4 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
LYSMD3Q7Z3D4 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LYSMD3Q7Z3D4 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.77■□□□□ 0.27
LYSMD3Q7Z3D4 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.77■□□□□ 0.27
LYSMD3Q7Z3D4 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
LYSMD3Q7Z3D4 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
LYSMD3Q7Z3D4 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LYSMD3Q7Z3D4 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.76■□□□□ 0.27
LYSMD3Q7Z3D4 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
LYSMD3Q7Z3D4 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
LYSMD3Q7Z3D4 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LYSMD3Q7Z3D4 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LYSMD3Q7Z3D4 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LYSMD3Q7Z3D4 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
LYSMD3Q7Z3D4 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LYSMD3Q7Z3D4 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LYSMD3Q7Z3D4 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LYSMD3Q7Z3D4 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.76■□□□□ 0.27
LYSMD3Q7Z3D4 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LYSMD3Q7Z3D4 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LYSMD3Q7Z3D4 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
LYSMD3Q7Z3D4 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.76■□□□□ 0.27
LYSMD3Q7Z3D4 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.76■□□□□ 0.27
LYSMD3Q7Z3D4 AC074386.1-202ENST00000463561 864 ntBASIC16.76■□□□□ 0.27
LYSMD3Q7Z3D4 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.76■□□□□ 0.27
LYSMD3Q7Z3D4 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LYSMD3Q7Z3D4 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.76■□□□□ 0.27
LYSMD3Q7Z3D4 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.76■□□□□ 0.27
LYSMD3Q7Z3D4 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.76■□□□□ 0.27
LYSMD3Q7Z3D4 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.76■□□□□ 0.27
LYSMD3Q7Z3D4 AL139011.1-202ENST00000642063 584 ntBASIC16.76■□□□□ 0.27
LYSMD3Q7Z3D4 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LYSMD3Q7Z3D4 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.76■□□□□ 0.27
LYSMD3Q7Z3D4 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.76■□□□□ 0.27
LYSMD3Q7Z3D4 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms