Protein–RNA interactions for Protein: Q6ZMY6

WDR88, WD repeat-containing protein 88, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WDR88Q6ZMY6 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
WDR88Q6ZMY6 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.23■□□□□ 0.03
WDR88Q6ZMY6 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.23■□□□□ 0.03
WDR88Q6ZMY6 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.23■□□□□ 0.03
WDR88Q6ZMY6 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
WDR88Q6ZMY6 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
WDR88Q6ZMY6 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
WDR88Q6ZMY6 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
WDR88Q6ZMY6 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
WDR88Q6ZMY6 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
WDR88Q6ZMY6 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
WDR88Q6ZMY6 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
WDR88Q6ZMY6 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15.23■□□□□ 0.03
WDR88Q6ZMY6 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
WDR88Q6ZMY6 RNPS1P1-201ENST00000507437 918 ntBASIC15.23■□□□□ 0.03
WDR88Q6ZMY6 AC136632.2-201ENST00000512891 861 ntBASIC15.23■□□□□ 0.03
WDR88Q6ZMY6 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.23■□□□□ 0.03
WDR88Q6ZMY6 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.23■□□□□ 0.03
WDR88Q6ZMY6 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC15.23■□□□□ 0.03
WDR88Q6ZMY6 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.23■□□□□ 0.03
WDR88Q6ZMY6 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.23■□□□□ 0.03
WDR88Q6ZMY6 AC012640.2-201ENST00000561606 901 ntBASIC15.23■□□□□ 0.03
WDR88Q6ZMY6 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.23■□□□□ 0.03
WDR88Q6ZMY6 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.23■□□□□ 0.03
WDR88Q6ZMY6 CYP2A7P1-201ENST00000595391 815 ntBASIC15.23■□□□□ 0.03
WDR88Q6ZMY6 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.23■□□□□ 0.03
WDR88Q6ZMY6 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
WDR88Q6ZMY6 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.23■□□□□ 0.03
WDR88Q6ZMY6 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.23■□□□□ 0.03
WDR88Q6ZMY6 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.23■□□□□ 0.03
WDR88Q6ZMY6 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
WDR88Q6ZMY6 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
WDR88Q6ZMY6 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
WDR88Q6ZMY6 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
WDR88Q6ZMY6 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
WDR88Q6ZMY6 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
WDR88Q6ZMY6 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
WDR88Q6ZMY6 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
WDR88Q6ZMY6 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
WDR88Q6ZMY6 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.23■□□□□ 0.03
WDR88Q6ZMY6 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
WDR88Q6ZMY6 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
WDR88Q6ZMY6 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
WDR88Q6ZMY6 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
WDR88Q6ZMY6 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
WDR88Q6ZMY6 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.23■□□□□ 0.03
WDR88Q6ZMY6 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
WDR88Q6ZMY6 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
WDR88Q6ZMY6 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
WDR88Q6ZMY6 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
WDR88Q6ZMY6 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
WDR88Q6ZMY6 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
WDR88Q6ZMY6 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
WDR88Q6ZMY6 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
WDR88Q6ZMY6 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
WDR88Q6ZMY6 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
WDR88Q6ZMY6 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
WDR88Q6ZMY6 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
WDR88Q6ZMY6 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
WDR88Q6ZMY6 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
WDR88Q6ZMY6 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
WDR88Q6ZMY6 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.22■□□□□ 0.03
WDR88Q6ZMY6 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.22■□□□□ 0.03
WDR88Q6ZMY6 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.22■□□□□ 0.03
WDR88Q6ZMY6 AC018712.1-201ENST00000455767 687 ntBASIC15.22■□□□□ 0.03
WDR88Q6ZMY6 AC073648.2-201ENST00000510116 352 ntBASIC15.22■□□□□ 0.03
WDR88Q6ZMY6 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.22■□□□□ 0.03
WDR88Q6ZMY6 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.22■□□□□ 0.03
WDR88Q6ZMY6 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.22■□□□□ 0.03
WDR88Q6ZMY6 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.22■□□□□ 0.03
WDR88Q6ZMY6 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
WDR88Q6ZMY6 AC008667.4-201ENST00000607370 168 ntBASIC15.22■□□□□ 0.03
WDR88Q6ZMY6 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.22■□□□□ 0.03
WDR88Q6ZMY6 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.22■□□□□ 0.03
WDR88Q6ZMY6 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
WDR88Q6ZMY6 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.22■□□□□ 0.03
WDR88Q6ZMY6 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.22■□□□□ 0.03
WDR88Q6ZMY6 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
WDR88Q6ZMY6 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
WDR88Q6ZMY6 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
WDR88Q6ZMY6 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.22■□□□□ 0.03
WDR88Q6ZMY6 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
WDR88Q6ZMY6 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.22■□□□□ 0.03
WDR88Q6ZMY6 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
WDR88Q6ZMY6 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.22■□□□□ 0.03
WDR88Q6ZMY6 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
WDR88Q6ZMY6 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.22■□□□□ 0.03
WDR88Q6ZMY6 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
WDR88Q6ZMY6 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
WDR88Q6ZMY6 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.03
WDR88Q6ZMY6 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
WDR88Q6ZMY6 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.21■□□□□ 0.03
WDR88Q6ZMY6 AP002414.3-201ENST00000589352 1468 ntBASIC15.21■□□□□ 0.03
WDR88Q6ZMY6 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
WDR88Q6ZMY6 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
WDR88Q6ZMY6 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
WDR88Q6ZMY6 AC007950.2-201ENST00000615045 2347 ntBASIC15.21■□□□□ 0.03
WDR88Q6ZMY6 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
WDR88Q6ZMY6 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
WDR88Q6ZMY6 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms