Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.06■□□□□ 0
RTL6Q6ICC9 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.06■□□□□ 0
RTL6Q6ICC9 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
RTL6Q6ICC9 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
RTL6Q6ICC9 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RTL6Q6ICC9 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.06■□□□□ 0
RTL6Q6ICC9 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
RTL6Q6ICC9 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
RTL6Q6ICC9 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
RTL6Q6ICC9 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.06■□□□□ 0
RTL6Q6ICC9 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.06■□□□□ 0
RTL6Q6ICC9 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RTL6Q6ICC9 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RTL6Q6ICC9 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.06■□□□□ 0
RTL6Q6ICC9 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RTL6Q6ICC9 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC15.06■□□□□ 0
RTL6Q6ICC9 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RTL6Q6ICC9 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
RTL6Q6ICC9 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.06■□□□□ 0
RTL6Q6ICC9 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.06■□□□□ 0
RTL6Q6ICC9 AL592309.1-201ENST00000443127 649 ntBASIC15.06■□□□□ 0
RTL6Q6ICC9 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.06■□□□□ 0
RTL6Q6ICC9 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.06■□□□□ 0
RTL6Q6ICC9 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.06■□□□□ 0
RTL6Q6ICC9 DUX4L17-201ENST00000557360 1267 ntBASIC15.06■□□□□ 0
RTL6Q6ICC9 AL135744.1-201ENST00000565098 629 ntBASIC15.06■□□□□ 0
RTL6Q6ICC9 RARRES2P8-201ENST00000566335 367 ntBASIC15.06■□□□□ 0
RTL6Q6ICC9 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.06■□□□□ 0
RTL6Q6ICC9 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC15.06■□□□□ 0
RTL6Q6ICC9 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
RTL6Q6ICC9 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.06■□□□□ 0
RTL6Q6ICC9 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.06■□□□□ 0
RTL6Q6ICC9 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
RTL6Q6ICC9 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
RTL6Q6ICC9 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
RTL6Q6ICC9 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
RTL6Q6ICC9 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RTL6Q6ICC9 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC15.06■□□□□ 0
RTL6Q6ICC9 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.06■□□□□ 0
RTL6Q6ICC9 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RTL6Q6ICC9 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.06■□□□□ 0
RTL6Q6ICC9 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.06■□□□□ 0
RTL6Q6ICC9 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RTL6Q6ICC9 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.06■□□□□ 0
RTL6Q6ICC9 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.06■□□□□ 0
RTL6Q6ICC9 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RTL6Q6ICC9 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.06■□□□□ 0
RTL6Q6ICC9 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.06■□□□□ 0
RTL6Q6ICC9 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
RTL6Q6ICC9 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
RTL6Q6ICC9 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.06■□□□□ 0
RTL6Q6ICC9 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.05■□□□□ 0
RTL6Q6ICC9 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
RTL6Q6ICC9 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
RTL6Q6ICC9 AC022211.2-201ENST00000585075 2527 ntBASIC15.05■□□□□ 0
RTL6Q6ICC9 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.05■□□□□ 0
RTL6Q6ICC9 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RTL6Q6ICC9 AC005237.2-201ENST00000434368 219 ntBASIC15.05■□□□□ -0
RTL6Q6ICC9 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.05■□□□□ -0
RTL6Q6ICC9 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.05■□□□□ -0
RTL6Q6ICC9 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.05■□□□□ -0
RTL6Q6ICC9 AL009183.1-201ENST00000603760 355 ntBASIC15.05■□□□□ -0
RTL6Q6ICC9 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RTL6Q6ICC9 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.05■□□□□ -0
RTL6Q6ICC9 AL353732.1-201ENST00000569618 1459 ntBASIC15.05■□□□□ -0
RTL6Q6ICC9 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.05■□□□□ -0
RTL6Q6ICC9 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
RTL6Q6ICC9 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RTL6Q6ICC9 AC093525.9-201ENST00000624961 1746 ntBASIC15.05■□□□□ -0
RTL6Q6ICC9 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.05■□□□□ -0
RTL6Q6ICC9 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RTL6Q6ICC9 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.05■□□□□ -0
RTL6Q6ICC9 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.05■□□□□ -0
RTL6Q6ICC9 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.05■□□□□ -0
RTL6Q6ICC9 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RTL6Q6ICC9 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.05■□□□□ -0
RTL6Q6ICC9 AC011270.2-201ENST00000624293 2550 ntBASIC15.05■□□□□ -0
RTL6Q6ICC9 AC011676.5-201ENST00000624864 2660 ntBASIC15.05■□□□□ -0
RTL6Q6ICC9 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
RTL6Q6ICC9 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.05■□□□□ -0
RTL6Q6ICC9 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
RTL6Q6ICC9 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
RTL6Q6ICC9 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
RTL6Q6ICC9 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.04■□□□□ -0
RTL6Q6ICC9 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RTL6Q6ICC9 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
RTL6Q6ICC9 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.04■□□□□ -0
RTL6Q6ICC9 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
RTL6Q6ICC9 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RTL6Q6ICC9 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
RTL6Q6ICC9 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
RTL6Q6ICC9 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.04■□□□□ -0
RTL6Q6ICC9 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
RTL6Q6ICC9 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.04■□□□□ -0
RTL6Q6ICC9 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.04■□□□□ -0
RTL6Q6ICC9 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.04■□□□□ -0
RTL6Q6ICC9 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.04■□□□□ -0
RTL6Q6ICC9 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RTL6Q6ICC9 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RTL6Q6ICC9 SLC22A20-204ENST00000530038 1673 ntBASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms