Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 AC106886.1-201ENST00000568660 600 ntBASIC16.24■□□□□ 0.19
LYSMD4Q5XG99 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC16.24■□□□□ 0.19
LYSMD4Q5XG99 AC026979.3-201ENST00000607315 403 ntBASIC16.24■□□□□ 0.19
LYSMD4Q5XG99 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC16.24■□□□□ 0.19
LYSMD4Q5XG99 AC004790.1-201ENST00000612686 536 ntBASIC16.24■□□□□ 0.19
LYSMD4Q5XG99 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.24■□□□□ 0.19
LYSMD4Q5XG99 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.24■□□□□ 0.19
LYSMD4Q5XG99 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
LYSMD4Q5XG99 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.24■□□□□ 0.19
LYSMD4Q5XG99 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.24■□□□□ 0.19
LYSMD4Q5XG99 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LYSMD4Q5XG99 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
LYSMD4Q5XG99 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LYSMD4Q5XG99 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LYSMD4Q5XG99 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LYSMD4Q5XG99 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.24■□□□□ 0.19
LYSMD4Q5XG99 SLC7A15P-201ENST00000424028 1363 ntBASIC16.24■□□□□ 0.19
LYSMD4Q5XG99 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.24■□□□□ 0.19
LYSMD4Q5XG99 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LYSMD4Q5XG99 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LYSMD4Q5XG99 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LYSMD4Q5XG99 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
LYSMD4Q5XG99 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
LYSMD4Q5XG99 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LYSMD4Q5XG99 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LYSMD4Q5XG99 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LYSMD4Q5XG99 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.23■□□□□ 0.19
LYSMD4Q5XG99 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LYSMD4Q5XG99 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.23■□□□□ 0.19
LYSMD4Q5XG99 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LYSMD4Q5XG99 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LYSMD4Q5XG99 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LYSMD4Q5XG99 LINC02012-201ENST00000608206 1725 ntBASIC16.23■□□□□ 0.19
LYSMD4Q5XG99 KRT8P39-201ENST00000396270 1433 ntBASIC16.23■□□□□ 0.19
LYSMD4Q5XG99 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
LYSMD4Q5XG99 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LYSMD4Q5XG99 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC16.23■□□□□ 0.19
LYSMD4Q5XG99 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LYSMD4Q5XG99 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LYSMD4Q5XG99 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.23■□□□□ 0.19
LYSMD4Q5XG99 AC079776.1-201ENST00000401540 1152 ntBASIC16.23■□□□□ 0.19
LYSMD4Q5XG99 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC16.23■□□□□ 0.19
LYSMD4Q5XG99 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LYSMD4Q5XG99 AC114501.2-201ENST00000439631 535 ntBASIC16.23■□□□□ 0.19
LYSMD4Q5XG99 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
LYSMD4Q5XG99 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.23■□□□□ 0.19
LYSMD4Q5XG99 SPDYE18-201ENST00000510091 1050 ntBASIC16.23■□□□□ 0.19
LYSMD4Q5XG99 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
LYSMD4Q5XG99 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC16.23■□□□□ 0.19
LYSMD4Q5XG99 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.23■□□□□ 0.19
LYSMD4Q5XG99 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC16.23■□□□□ 0.19
LYSMD4Q5XG99 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.23■□□□□ 0.19
LYSMD4Q5XG99 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.23■□□□□ 0.19
LYSMD4Q5XG99 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
LYSMD4Q5XG99 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LYSMD4Q5XG99 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LYSMD4Q5XG99 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LYSMD4Q5XG99 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LYSMD4Q5XG99 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LYSMD4Q5XG99 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
LYSMD4Q5XG99 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.22■□□□□ 0.19
LYSMD4Q5XG99 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
LYSMD4Q5XG99 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LYSMD4Q5XG99 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.22■□□□□ 0.19
LYSMD4Q5XG99 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LYSMD4Q5XG99 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
LYSMD4Q5XG99 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LYSMD4Q5XG99 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LYSMD4Q5XG99 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
LYSMD4Q5XG99 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
LYSMD4Q5XG99 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LYSMD4Q5XG99 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LYSMD4Q5XG99 MIR658-201ENST00000385210 100 ntBASIC16.22■□□□□ 0.19
LYSMD4Q5XG99 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.22■□□□□ 0.19
LYSMD4Q5XG99 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.22■□□□□ 0.19
LYSMD4Q5XG99 AC112492.5-201ENST00000421897 457 ntBASIC16.22■□□□□ 0.19
LYSMD4Q5XG99 MEP1AP4-201ENST00000423244 1087 ntBASIC16.22■□□□□ 0.19
LYSMD4Q5XG99 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
LYSMD4Q5XG99 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LYSMD4Q5XG99 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.22■□□□□ 0.19
LYSMD4Q5XG99 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC16.22■□□□□ 0.19
LYSMD4Q5XG99 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.22■□□□□ 0.19
LYSMD4Q5XG99 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.22■□□□□ 0.19
LYSMD4Q5XG99 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.22■□□□□ 0.19
LYSMD4Q5XG99 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.22■□□□□ 0.19
LYSMD4Q5XG99 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LYSMD4Q5XG99 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LYSMD4Q5XG99 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.22■□□□□ 0.19
LYSMD4Q5XG99 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LYSMD4Q5XG99 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LYSMD4Q5XG99 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LYSMD4Q5XG99 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LYSMD4Q5XG99 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.22■□□□□ 0.19
LYSMD4Q5XG99 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
LYSMD4Q5XG99 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LYSMD4Q5XG99 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LYSMD4Q5XG99 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
LYSMD4Q5XG99 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
LYSMD4Q5XG99 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
LYSMD4Q5XG99 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms