Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TTC39BQ5VTQ0 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TTC39BQ5VTQ0 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TTC39BQ5VTQ0 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TTC39BQ5VTQ0 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TTC39BQ5VTQ0 PCDH8P1-201ENST00000428983 2773 ntBASIC17.4■□□□□ 0.38
TTC39BQ5VTQ0 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
TTC39BQ5VTQ0 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
TTC39BQ5VTQ0 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TTC39BQ5VTQ0 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.39■□□□□ 0.37
TTC39BQ5VTQ0 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TTC39BQ5VTQ0 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TTC39BQ5VTQ0 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TTC39BQ5VTQ0 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
TTC39BQ5VTQ0 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
TTC39BQ5VTQ0 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TTC39BQ5VTQ0 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.39■□□□□ 0.37
TTC39BQ5VTQ0 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
TTC39BQ5VTQ0 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.39■□□□□ 0.37
TTC39BQ5VTQ0 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TTC39BQ5VTQ0 AC068137.2-201ENST00000605408 478 ntBASIC17.39■□□□□ 0.37
TTC39BQ5VTQ0 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
TTC39BQ5VTQ0 AP001350.2-201ENST00000625104 1094 ntBASIC17.39■□□□□ 0.37
TTC39BQ5VTQ0 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TTC39BQ5VTQ0 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.39■□□□□ 0.37
TTC39BQ5VTQ0 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TTC39BQ5VTQ0 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TTC39BQ5VTQ0 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
TTC39BQ5VTQ0 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TTC39BQ5VTQ0 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.39■□□□□ 0.37
TTC39BQ5VTQ0 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.39■□□□□ 0.37
TTC39BQ5VTQ0 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TTC39BQ5VTQ0 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TTC39BQ5VTQ0 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TTC39BQ5VTQ0 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.39■□□□□ 0.37
TTC39BQ5VTQ0 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TTC39BQ5VTQ0 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.39■□□□□ 0.37
TTC39BQ5VTQ0 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.39■□□□□ 0.37
TTC39BQ5VTQ0 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TTC39BQ5VTQ0 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
TTC39BQ5VTQ0 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
TTC39BQ5VTQ0 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TTC39BQ5VTQ0 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
TTC39BQ5VTQ0 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TTC39BQ5VTQ0 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TTC39BQ5VTQ0 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TTC39BQ5VTQ0 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TTC39BQ5VTQ0 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TTC39BQ5VTQ0 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
TTC39BQ5VTQ0 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.38■□□□□ 0.37
TTC39BQ5VTQ0 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TTC39BQ5VTQ0 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TTC39BQ5VTQ0 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
TTC39BQ5VTQ0 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.38■□□□□ 0.37
TTC39BQ5VTQ0 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
TTC39BQ5VTQ0 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TTC39BQ5VTQ0 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.38■□□□□ 0.37
TTC39BQ5VTQ0 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.38■□□□□ 0.37
TTC39BQ5VTQ0 GPX1P2-201ENST00000429271 606 ntBASIC17.38■□□□□ 0.37
TTC39BQ5VTQ0 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.38■□□□□ 0.37
TTC39BQ5VTQ0 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TTC39BQ5VTQ0 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
TTC39BQ5VTQ0 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TTC39BQ5VTQ0 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
TTC39BQ5VTQ0 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TTC39BQ5VTQ0 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TTC39BQ5VTQ0 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TTC39BQ5VTQ0 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TTC39BQ5VTQ0 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TTC39BQ5VTQ0 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TTC39BQ5VTQ0 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.38■□□□□ 0.37
TTC39BQ5VTQ0 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.38■□□□□ 0.37
TTC39BQ5VTQ0 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
TTC39BQ5VTQ0 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TTC39BQ5VTQ0 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TTC39BQ5VTQ0 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TTC39BQ5VTQ0 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TTC39BQ5VTQ0 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TTC39BQ5VTQ0 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TTC39BQ5VTQ0 AC012569.1-201ENST00000591191 1524 ntBASIC17.37■□□□□ 0.37
TTC39BQ5VTQ0 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TTC39BQ5VTQ0 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TTC39BQ5VTQ0 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.37■□□□□ 0.37
TTC39BQ5VTQ0 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TTC39BQ5VTQ0 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.37■□□□□ 0.37
TTC39BQ5VTQ0 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.37■□□□□ 0.37
TTC39BQ5VTQ0 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.37■□□□□ 0.37
TTC39BQ5VTQ0 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TTC39BQ5VTQ0 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TTC39BQ5VTQ0 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TTC39BQ5VTQ0 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TTC39BQ5VTQ0 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TTC39BQ5VTQ0 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.37■□□□□ 0.37
TTC39BQ5VTQ0 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TTC39BQ5VTQ0 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TTC39BQ5VTQ0 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TTC39BQ5VTQ0 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.37■□□□□ 0.37
TTC39BQ5VTQ0 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.37■□□□□ 0.37
TTC39BQ5VTQ0 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TTC39BQ5VTQ0 UPF3AP3-201ENST00000420996 769 ntBASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms