Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CDC42BPAQ5VT25 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
CDC42BPAQ5VT25 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
CDC42BPAQ5VT25 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
CDC42BPAQ5VT25 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
CDC42BPAQ5VT25 MPV17-208ENST00000405076 603 ntTSL 5 BASIC24.8■■□□□ 1.56
CDC42BPAQ5VT25 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC24.8■■□□□ 1.56
CDC42BPAQ5VT25 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC24.8■■□□□ 1.56
CDC42BPAQ5VT25 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC24.8■■□□□ 1.56
CDC42BPAQ5VT25 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC24.8■■□□□ 1.56
CDC42BPAQ5VT25 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC24.8■■□□□ 1.56
CDC42BPAQ5VT25 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
CDC42BPAQ5VT25 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CDC42BPAQ5VT25 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC24.79■■□□□ 1.56
CDC42BPAQ5VT25 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CDC42BPAQ5VT25 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
CDC42BPAQ5VT25 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC24.79■■□□□ 1.56
CDC42BPAQ5VT25 AC234783.1-201ENST00000441761 496 ntBASIC24.79■■□□□ 1.56
CDC42BPAQ5VT25 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CDC42BPAQ5VT25 AC245100.5-201ENST00000452108 331 ntBASIC24.79■■□□□ 1.56
CDC42BPAQ5VT25 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC24.79■■□□□ 1.56
CDC42BPAQ5VT25 AL365330.1-201ENST00000607459 531 ntBASIC24.79■■□□□ 1.56
CDC42BPAQ5VT25 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CDC42BPAQ5VT25 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
CDC42BPAQ5VT25 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CDC42BPAQ5VT25 Z97205.2-201ENST00000564697 1639 ntBASIC24.79■■□□□ 1.56
CDC42BPAQ5VT25 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CDC42BPAQ5VT25 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CDC42BPAQ5VT25 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CDC42BPAQ5VT25 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CDC42BPAQ5VT25 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC24.78■■□□□ 1.56
CDC42BPAQ5VT25 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC24.78■■□□□ 1.56
CDC42BPAQ5VT25 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CDC42BPAQ5VT25 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CDC42BPAQ5VT25 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CDC42BPAQ5VT25 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC24.78■■□□□ 1.56
CDC42BPAQ5VT25 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC24.78■■□□□ 1.56
CDC42BPAQ5VT25 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
CDC42BPAQ5VT25 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
CDC42BPAQ5VT25 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC24.78■■□□□ 1.56
CDC42BPAQ5VT25 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CDC42BPAQ5VT25 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC24.78■■□□□ 1.56
CDC42BPAQ5VT25 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
CDC42BPAQ5VT25 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
CDC42BPAQ5VT25 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
CDC42BPAQ5VT25 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
CDC42BPAQ5VT25 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CDC42BPAQ5VT25 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
CDC42BPAQ5VT25 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC24.78■■□□□ 1.56
CDC42BPAQ5VT25 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
CDC42BPAQ5VT25 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC24.78■■□□□ 1.56
CDC42BPAQ5VT25 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
CDC42BPAQ5VT25 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC24.78■■□□□ 1.56
CDC42BPAQ5VT25 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
CDC42BPAQ5VT25 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC24.78■■□□□ 1.56
CDC42BPAQ5VT25 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC24.78■■□□□ 1.56
CDC42BPAQ5VT25 AL512343.1-201ENST00000605837 169 ntBASIC24.78■■□□□ 1.56
CDC42BPAQ5VT25 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
CDC42BPAQ5VT25 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC24.77■■□□□ 1.56
CDC42BPAQ5VT25 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
CDC42BPAQ5VT25 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CDC42BPAQ5VT25 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC24.77■■□□□ 1.56
CDC42BPAQ5VT25 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
CDC42BPAQ5VT25 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC24.77■■□□□ 1.56
CDC42BPAQ5VT25 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
CDC42BPAQ5VT25 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC24.77■■□□□ 1.56
CDC42BPAQ5VT25 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
CDC42BPAQ5VT25 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
CDC42BPAQ5VT25 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
CDC42BPAQ5VT25 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC24.77■■□□□ 1.56
CDC42BPAQ5VT25 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC24.77■■□□□ 1.56
CDC42BPAQ5VT25 AC022210.1-201ENST00000449856 793 ntBASIC24.77■■□□□ 1.56
CDC42BPAQ5VT25 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC24.77■■□□□ 1.56
CDC42BPAQ5VT25 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC24.77■■□□□ 1.56
CDC42BPAQ5VT25 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
CDC42BPAQ5VT25 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC24.77■■□□□ 1.56
CDC42BPAQ5VT25 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC24.76■■□□□ 1.56
CDC42BPAQ5VT25 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC24.76■■□□□ 1.55
CDC42BPAQ5VT25 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC24.76■■□□□ 1.55
CDC42BPAQ5VT25 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CDC42BPAQ5VT25 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC24.76■■□□□ 1.55
CDC42BPAQ5VT25 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC24.76■■□□□ 1.55
CDC42BPAQ5VT25 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC24.76■■□□□ 1.55
CDC42BPAQ5VT25 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC24.76■■□□□ 1.55
CDC42BPAQ5VT25 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
CDC42BPAQ5VT25 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC24.76■■□□□ 1.55
CDC42BPAQ5VT25 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC24.76■■□□□ 1.55
CDC42BPAQ5VT25 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC24.76■■□□□ 1.55
CDC42BPAQ5VT25 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
CDC42BPAQ5VT25 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC24.76■■□□□ 1.55
CDC42BPAQ5VT25 TMEM261P1-201ENST00000604899 340 ntBASIC24.76■■□□□ 1.55
CDC42BPAQ5VT25 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
CDC42BPAQ5VT25 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC24.76■■□□□ 1.55
CDC42BPAQ5VT25 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
CDC42BPAQ5VT25 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
CDC42BPAQ5VT25 BANP-227ENST00000626016 2144 ntTSL 2 BASIC24.76■■□□□ 1.55
CDC42BPAQ5VT25 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC24.76■■□□□ 1.55
CDC42BPAQ5VT25 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CDC42BPAQ5VT25 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CDC42BPAQ5VT25 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC24.76■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms