Protein–RNA interactions for Protein: Q5JQF7

LINC01556, Putative uncharacterized protein encoded by LINC01556, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01556Q5JQF7 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01556Q5JQF7 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01556Q5JQF7 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01556Q5JQF7 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01556Q5JQF7 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01556Q5JQF7 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01556Q5JQF7 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01556Q5JQF7 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01556Q5JQF7 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01556Q5JQF7 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01556Q5JQF7 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01556Q5JQF7 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01556Q5JQF7 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC11.33□□□□□ -0.6
LINC01556Q5JQF7 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01556Q5JQF7 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
LINC01556Q5JQF7 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01556Q5JQF7 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
LINC01556Q5JQF7 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01556Q5JQF7 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01556Q5JQF7 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC11.33□□□□□ -0.6
LINC01556Q5JQF7 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01556Q5JQF7 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC11.33□□□□□ -0.6
LINC01556Q5JQF7 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC11.33□□□□□ -0.6
LINC01556Q5JQF7 AC020765.3-201ENST00000613051 740 ntBASIC11.33□□□□□ -0.6
LINC01556Q5JQF7 AC091812.2-201ENST00000619081 385 ntBASIC11.33□□□□□ -0.6
LINC01556Q5JQF7 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
LINC01556Q5JQF7 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
LINC01556Q5JQF7 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01556Q5JQF7 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01556Q5JQF7 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
LINC01556Q5JQF7 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01556Q5JQF7 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC11.33□□□□□ -0.6
LINC01556Q5JQF7 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01556Q5JQF7 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
LINC01556Q5JQF7 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
LINC01556Q5JQF7 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC11.33□□□□□ -0.6
LINC01556Q5JQF7 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01556Q5JQF7 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC11.33□□□□□ -0.6
LINC01556Q5JQF7 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01556Q5JQF7 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
LINC01556Q5JQF7 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01556Q5JQF7 OS9-205ENST00000413095 1660 ntTSL 2 BASIC11.33□□□□□ -0.6
LINC01556Q5JQF7 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01556Q5JQF7 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01556Q5JQF7 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01556Q5JQF7 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01556Q5JQF7 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01556Q5JQF7 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC11.32□□□□□ -0.6
LINC01556Q5JQF7 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01556Q5JQF7 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
LINC01556Q5JQF7 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01556Q5JQF7 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01556Q5JQF7 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC11.32□□□□□ -0.6
LINC01556Q5JQF7 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
LINC01556Q5JQF7 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC11.32□□□□□ -0.6
LINC01556Q5JQF7 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01556Q5JQF7 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01556Q5JQF7 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC11.32□□□□□ -0.6
LINC01556Q5JQF7 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01556Q5JQF7 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
LINC01556Q5JQF7 HLA-A-202ENST00000376806 1854 ntBASIC11.32□□□□□ -0.6
LINC01556Q5JQF7 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC11.32□□□□□ -0.6
LINC01556Q5JQF7 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
LINC01556Q5JQF7 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC11.32□□□□□ -0.6
LINC01556Q5JQF7 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
LINC01556Q5JQF7 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01556Q5JQF7 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
LINC01556Q5JQF7 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
LINC01556Q5JQF7 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01556Q5JQF7 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01556Q5JQF7 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01556Q5JQF7 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01556Q5JQF7 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01556Q5JQF7 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
LINC01556Q5JQF7 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01556Q5JQF7 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC11.32□□□□□ -0.6
LINC01556Q5JQF7 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01556Q5JQF7 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC11.32□□□□□ -0.6
LINC01556Q5JQF7 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC11.32□□□□□ -0.6
LINC01556Q5JQF7 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC11.32□□□□□ -0.6
LINC01556Q5JQF7 AC092474.2-201ENST00000424288 719 ntBASIC11.32□□□□□ -0.6
LINC01556Q5JQF7 FAM58CP-201ENST00000435741 640 ntBASIC11.32□□□□□ -0.6
LINC01556Q5JQF7 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC11.32□□□□□ -0.6
LINC01556Q5JQF7 FAM86C2P-203ENST00000528684 1004 ntBASIC11.32□□□□□ -0.6
LINC01556Q5JQF7 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC11.32□□□□□ -0.6
LINC01556Q5JQF7 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC11.32□□□□□ -0.6
LINC01556Q5JQF7 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC11.32□□□□□ -0.6
LINC01556Q5JQF7 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC11.32□□□□□ -0.6
LINC01556Q5JQF7 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
LINC01556Q5JQF7 HOTTIP_1.1-201ENST00000620415 57 ntBASIC11.32□□□□□ -0.6
LINC01556Q5JQF7 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC11.32□□□□□ -0.6
LINC01556Q5JQF7 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
LINC01556Q5JQF7 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC11.32□□□□□ -0.6
LINC01556Q5JQF7 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01556Q5JQF7 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
LINC01556Q5JQF7 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC11.32□□□□□ -0.6
LINC01556Q5JQF7 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01556Q5JQF7 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01556Q5JQF7 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01556Q5JQF7 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC11.32□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms