Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
YBX1P67809 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
YBX1P67809 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
YBX1P67809 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
YBX1P67809 KRT18P58-201ENST00000527480 1120 ntBASIC16.27■□□□□ 0.2
YBX1P67809 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.27■□□□□ 0.2
YBX1P67809 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.27■□□□□ 0.2
YBX1P67809 FAM197Y3-203ENST00000618346 717 ntBASIC16.27■□□□□ 0.2
YBX1P67809 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
YBX1P67809 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
YBX1P67809 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
YBX1P67809 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
YBX1P67809 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
YBX1P67809 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
YBX1P67809 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.27■□□□□ 0.19
YBX1P67809 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
YBX1P67809 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.27■□□□□ 0.19
YBX1P67809 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
YBX1P67809 AL021920.2-201ENST00000624828 1351 ntBASIC16.26■□□□□ 0.19
YBX1P67809 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
YBX1P67809 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
YBX1P67809 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
YBX1P67809 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.26■□□□□ 0.19
YBX1P67809 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
YBX1P67809 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
YBX1P67809 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
YBX1P67809 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.26■□□□□ 0.19
YBX1P67809 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
YBX1P67809 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
YBX1P67809 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
YBX1P67809 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
YBX1P67809 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
YBX1P67809 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.26■□□□□ 0.19
YBX1P67809 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.26■□□□□ 0.19
YBX1P67809 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.26■□□□□ 0.19
YBX1P67809 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.26■□□□□ 0.19
YBX1P67809 RHOQP3-201ENST00000437982 621 ntBASIC16.26■□□□□ 0.19
YBX1P67809 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
YBX1P67809 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.26■□□□□ 0.19
YBX1P67809 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
YBX1P67809 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.26■□□□□ 0.19
YBX1P67809 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.26■□□□□ 0.19
YBX1P67809 AC096734.2-201ENST00000562054 433 ntBASIC16.26■□□□□ 0.19
YBX1P67809 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.26■□□□□ 0.19
YBX1P67809 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
YBX1P67809 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.26■□□□□ 0.19
YBX1P67809 AC004877.2-201ENST00000623941 599 ntBASIC16.26■□□□□ 0.19
YBX1P67809 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
YBX1P67809 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
YBX1P67809 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.26■□□□□ 0.19
YBX1P67809 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
YBX1P67809 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
YBX1P67809 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.26■□□□□ 0.19
YBX1P67809 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
YBX1P67809 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.26■□□□□ 0.19
YBX1P67809 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
YBX1P67809 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.25■□□□□ 0.19
YBX1P67809 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
YBX1P67809 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
YBX1P67809 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.25■□□□□ 0.19
YBX1P67809 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
YBX1P67809 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
YBX1P67809 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
YBX1P67809 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
YBX1P67809 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
YBX1P67809 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.25■□□□□ 0.19
YBX1P67809 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
YBX1P67809 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
YBX1P67809 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.25■□□□□ 0.19
YBX1P67809 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.25■□□□□ 0.19
YBX1P67809 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.25■□□□□ 0.19
YBX1P67809 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.25■□□□□ 0.19
YBX1P67809 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
YBX1P67809 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.25■□□□□ 0.19
YBX1P67809 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.25■□□□□ 0.19
YBX1P67809 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.25■□□□□ 0.19
YBX1P67809 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
YBX1P67809 MPDU1-223ENST00000582151 728 ntBASIC16.25■□□□□ 0.19
YBX1P67809 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.25■□□□□ 0.19
YBX1P67809 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
YBX1P67809 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.25■□□□□ 0.19
YBX1P67809 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
YBX1P67809 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
YBX1P67809 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
YBX1P67809 AC025580.3-201ENST00000617932 1424 ntBASIC16.25■□□□□ 0.19
YBX1P67809 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
YBX1P67809 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
YBX1P67809 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
YBX1P67809 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
YBX1P67809 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
YBX1P67809 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
YBX1P67809 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
YBX1P67809 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
YBX1P67809 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
YBX1P67809 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.25■□□□□ 0.19
YBX1P67809 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
YBX1P67809 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
YBX1P67809 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
YBX1P67809 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
YBX1P67809 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms