Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CLRN1P58418 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLRN1P58418 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLRN1P58418 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CLRN1P58418 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CLRN1P58418 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLRN1P58418 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.94□□□□□ -0.02
CLRN1P58418 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.94□□□□□ -0.02
CLRN1P58418 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLRN1P58418 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CLRN1P58418 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLRN1P58418 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CLRN1P58418 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLRN1P58418 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
CLRN1P58418 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CLRN1P58418 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CLRN1P58418 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC14.94□□□□□ -0.02
CLRN1P58418 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
CLRN1P58418 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLRN1P58418 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.94□□□□□ -0.02
CLRN1P58418 METTL26-205ENST00000397666 726 ntTSL 2 BASIC14.94□□□□□ -0.02
CLRN1P58418 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
CLRN1P58418 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.94□□□□□ -0.02
CLRN1P58418 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CLRN1P58418 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLRN1P58418 AC107918.2-201ENST00000530817 355 ntBASIC14.94□□□□□ -0.02
CLRN1P58418 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.94□□□□□ -0.02
CLRN1P58418 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.94□□□□□ -0.02
CLRN1P58418 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.94□□□□□ -0.02
CLRN1P58418 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.94□□□□□ -0.02
CLRN1P58418 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLRN1P58418 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
CLRN1P58418 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC14.94□□□□□ -0.02
CLRN1P58418 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC14.94□□□□□ -0.02
CLRN1P58418 MIR7706-201ENST00000613747 67 ntBASIC14.94□□□□□ -0.02
CLRN1P58418 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.94□□□□□ -0.02
CLRN1P58418 AC004790.2-201ENST00000623588 572 ntBASIC14.94□□□□□ -0.02
CLRN1P58418 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.94□□□□□ -0.02
CLRN1P58418 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC14.94□□□□□ -0.02
CLRN1P58418 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLRN1P58418 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CLRN1P58418 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.94□□□□□ -0.02
CLRN1P58418 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CLRN1P58418 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
CLRN1P58418 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLRN1P58418 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CLRN1P58418 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLRN1P58418 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLRN1P58418 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLRN1P58418 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.94□□□□□ -0.02
CLRN1P58418 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLRN1P58418 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLRN1P58418 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC14.93□□□□□ -0.02
CLRN1P58418 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLRN1P58418 AC068587.6-202ENST00000641839 5619 ntBASIC14.93□□□□□ -0.02
CLRN1P58418 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC14.93□□□□□ -0.02
CLRN1P58418 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14.93□□□□□ -0.02
CLRN1P58418 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.93□□□□□ -0.02
CLRN1P58418 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.93□□□□□ -0.02
CLRN1P58418 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLRN1P58418 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC14.93□□□□□ -0.02
CLRN1P58418 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLRN1P58418 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CLRN1P58418 MRPL3P1-201ENST00000400109 1033 ntBASIC14.93□□□□□ -0.02
CLRN1P58418 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLRN1P58418 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.93□□□□□ -0.02
CLRN1P58418 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.93□□□□□ -0.02
CLRN1P58418 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLRN1P58418 AC098831.1-202ENST00000438821 336 ntBASIC14.93□□□□□ -0.02
CLRN1P58418 AC108751.1-201ENST00000490852 363 ntBASIC14.93□□□□□ -0.02
CLRN1P58418 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC14.93□□□□□ -0.02
CLRN1P58418 AL049840.3-201ENST00000602669 611 ntBASIC14.93□□□□□ -0.02
CLRN1P58418 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.93□□□□□ -0.02
CLRN1P58418 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14.93□□□□□ -0.02
CLRN1P58418 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CLRN1P58418 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLRN1P58418 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLRN1P58418 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLRN1P58418 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC14.93□□□□□ -0.02
CLRN1P58418 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC14.93□□□□□ -0.02
CLRN1P58418 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CLRN1P58418 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CLRN1P58418 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLRN1P58418 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLRN1P58418 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CLRN1P58418 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CLRN1P58418 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC14.92□□□□□ -0.02
CLRN1P58418 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CLRN1P58418 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLRN1P58418 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CLRN1P58418 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLRN1P58418 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLRN1P58418 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLRN1P58418 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC14.92□□□□□ -0.02
CLRN1P58418 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.92□□□□□ -0.02
CLRN1P58418 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLRN1P58418 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.92□□□□□ -0.02
CLRN1P58418 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CLRN1P58418 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLRN1P58418 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms