Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 PI4KAP1-204ENST00000612579 1703 ntBASIC16.37■□□□□ 0.21
CDH13P55290 AL512652.2-201ENST00000625156 1716 ntBASIC16.37■□□□□ 0.21
CDH13P55290 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH13P55290 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH13P55290 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDH13P55290 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDH13P55290 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDH13P55290 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH13P55290 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.37■□□□□ 0.21
CDH13P55290 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.37■□□□□ 0.21
CDH13P55290 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.37■□□□□ 0.21
CDH13P55290 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.37■□□□□ 0.21
CDH13P55290 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH13P55290 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDH13P55290 AC087163.2-201ENST00000457299 853 ntBASIC16.37■□□□□ 0.21
CDH13P55290 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH13P55290 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.37■□□□□ 0.21
CDH13P55290 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.37■□□□□ 0.21
CDH13P55290 AC091304.2-201ENST00000564639 760 ntBASIC16.37■□□□□ 0.21
CDH13P55290 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.37■□□□□ 0.21
CDH13P55290 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.37■□□□□ 0.21
CDH13P55290 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDH13P55290 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH13P55290 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH13P55290 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.37■□□□□ 0.21
CDH13P55290 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CDH13P55290 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.37■□□□□ 0.21
CDH13P55290 AC002310.6-201ENST00000624451 1377 ntBASIC16.37■□□□□ 0.21
CDH13P55290 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.37■□□□□ 0.21
CDH13P55290 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDH13P55290 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CDH13P55290 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CDH13P55290 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.36■□□□□ 0.21
CDH13P55290 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDH13P55290 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.36■□□□□ 0.21
CDH13P55290 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CDH13P55290 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDH13P55290 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDH13P55290 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDH13P55290 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CDH13P55290 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.36■□□□□ 0.21
CDH13P55290 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDH13P55290 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.36■□□□□ 0.21
CDH13P55290 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.36■□□□□ 0.21
CDH13P55290 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.36■□□□□ 0.21
CDH13P55290 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CDH13P55290 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.36■□□□□ 0.21
CDH13P55290 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
CDH13P55290 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.36■□□□□ 0.21
CDH13P55290 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.36■□□□□ 0.21
CDH13P55290 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.36■□□□□ 0.21
CDH13P55290 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CDH13P55290 MPDU1-223ENST00000582151 728 ntBASIC16.36■□□□□ 0.21
CDH13P55290 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDH13P55290 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.36■□□□□ 0.21
CDH13P55290 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDH13P55290 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CDH13P55290 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDH13P55290 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CDH13P55290 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CDH13P55290 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.36■□□□□ 0.21
CDH13P55290 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.36■□□□□ 0.21
CDH13P55290 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.36■□□□□ 0.21
CDH13P55290 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDH13P55290 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CDH13P55290 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDH13P55290 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDH13P55290 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDH13P55290 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
CDH13P55290 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.36■□□□□ 0.21
CDH13P55290 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.35■□□□□ 0.21
CDH13P55290 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.35■□□□□ 0.21
CDH13P55290 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.35■□□□□ 0.21
CDH13P55290 HYMAI-201ENST00000635591 3347 ntBASIC16.35■□□□□ 0.21
CDH13P55290 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CDH13P55290 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.35■□□□□ 0.21
CDH13P55290 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.35■□□□□ 0.21
CDH13P55290 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.35■□□□□ 0.21
CDH13P55290 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.35■□□□□ 0.21
CDH13P55290 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.35■□□□□ 0.21
CDH13P55290 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CDH13P55290 AC006504.4-201ENST00000592118 1568 ntBASIC16.35■□□□□ 0.21
CDH13P55290 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.35■□□□□ 0.21
CDH13P55290 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CDH13P55290 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.35■□□□□ 0.21
CDH13P55290 GGT3P-204ENST00000453783 1664 ntBASIC16.35■□□□□ 0.21
CDH13P55290 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.35■□□□□ 0.21
CDH13P55290 AKR1C7P-201ENST00000305623 895 ntBASIC16.35■□□□□ 0.21
CDH13P55290 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.35■□□□□ 0.21
CDH13P55290 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH13P55290 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH13P55290 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CDH13P55290 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDH13P55290 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.35■□□□□ 0.21
CDH13P55290 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.35■□□□□ 0.21
CDH13P55290 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CDH13P55290 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.35■□□□□ 0.21
CDH13P55290 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.35■□□□□ 0.21
CDH13P55290 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.35■□□□□ 0.21
CDH13P55290 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms