Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
BRCA2P51587 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
BRCA2P51587 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC18.37■□□□□ 0.53
BRCA2P51587 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
BRCA2P51587 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
BRCA2P51587 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BRCA2P51587 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC18.37■□□□□ 0.53
BRCA2P51587 BICD1-207ENST00000551848 1962 ntBASIC18.37■□□□□ 0.53
BRCA2P51587 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC18.37■□□□□ 0.53
BRCA2P51587 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.37■□□□□ 0.53
BRCA2P51587 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BRCA2P51587 AC108860.2-201ENST00000562760 2183 ntBASIC18.37■□□□□ 0.53
BRCA2P51587 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BRCA2P51587 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.36■□□□□ 0.53
BRCA2P51587 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
BRCA2P51587 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BRCA2P51587 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
BRCA2P51587 BTBD6P1-201ENST00000412176 1267 ntBASIC18.36■□□□□ 0.53
BRCA2P51587 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC18.36■□□□□ 0.53
BRCA2P51587 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.36■□□□□ 0.53
BRCA2P51587 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
BRCA2P51587 FRMD8P1-201ENST00000440433 1524 ntBASIC18.36■□□□□ 0.53
BRCA2P51587 IMPDH1P4-201ENST00000445028 1534 ntBASIC18.36■□□□□ 0.53
BRCA2P51587 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
BRCA2P51587 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.36■□□□□ 0.53
BRCA2P51587 AC093525.9-201ENST00000624961 1746 ntBASIC18.36■□□□□ 0.53
BRCA2P51587 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BRCA2P51587 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
BRCA2P51587 RN7SL560P-201ENST00000577943 264 ntBASIC18.36■□□□□ 0.53
BRCA2P51587 NEFHP1-201ENST00000412845 2629 ntBASIC18.36■□□□□ 0.53
BRCA2P51587 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.36■□□□□ 0.53
BRCA2P51587 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
BRCA2P51587 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
BRCA2P51587 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
BRCA2P51587 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.36■□□□□ 0.53
BRCA2P51587 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BRCA2P51587 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
BRCA2P51587 AMT-232ENST00000636199 1546 ntTSL 5 BASIC18.36■□□□□ 0.53
BRCA2P51587 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BRCA2P51587 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BRCA2P51587 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BRCA2P51587 GZMB-202ENST00000382540 816 ntTSL 5 BASIC18.36■□□□□ 0.53
BRCA2P51587 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
BRCA2P51587 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC18.36■□□□□ 0.53
BRCA2P51587 SLC25A47P1-201ENST00000531577 414 ntBASIC18.36■□□□□ 0.53
BRCA2P51587 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
BRCA2P51587 AC061975.2-201ENST00000581722 295 ntBASIC18.36■□□□□ 0.53
BRCA2P51587 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
BRCA2P51587 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC18.36■□□□□ 0.53
BRCA2P51587 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC18.36■□□□□ 0.53
BRCA2P51587 AC092053.1-201ENST00000605787 1936 ntBASIC18.35■□□□□ 0.53
BRCA2P51587 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
BRCA2P51587 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
BRCA2P51587 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BRCA2P51587 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
BRCA2P51587 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BRCA2P51587 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
BRCA2P51587 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.35■□□□□ 0.53
BRCA2P51587 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
BRCA2P51587 MEP1AP4-201ENST00000423244 1087 ntBASIC18.35■□□□□ 0.53
BRCA2P51587 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC18.35■□□□□ 0.53
BRCA2P51587 AP000812.2-201ENST00000538934 718 ntBASIC18.35■□□□□ 0.53
BRCA2P51587 DUX4L45-201ENST00000566406 1057 ntBASIC18.35■□□□□ 0.53
BRCA2P51587 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
BRCA2P51587 CYP2A7P1-201ENST00000595391 815 ntBASIC18.35■□□□□ 0.53
BRCA2P51587 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC18.35■□□□□ 0.53
BRCA2P51587 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BRCA2P51587 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.35■□□□□ 0.53
BRCA2P51587 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BRCA2P51587 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BRCA2P51587 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC18.35■□□□□ 0.53
BRCA2P51587 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC18.35■□□□□ 0.53
BRCA2P51587 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
BRCA2P51587 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC18.35■□□□□ 0.53
BRCA2P51587 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
BRCA2P51587 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BRCA2P51587 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.35■□□□□ 0.53
BRCA2P51587 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC18.35■□□□□ 0.53
BRCA2P51587 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.35■□□□□ 0.53
BRCA2P51587 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
BRCA2P51587 BOLA2P3-201ENST00000404566 256 ntBASIC18.35■□□□□ 0.53
BRCA2P51587 BCRP2-202ENST00000447763 634 ntBASIC18.35■□□□□ 0.53
BRCA2P51587 KLF2P4-201ENST00000451959 1225 ntBASIC18.35■□□□□ 0.53
BRCA2P51587 BCRP6-201ENST00000510112 632 ntBASIC18.35■□□□□ 0.53
BRCA2P51587 BCRP7-201ENST00000511549 544 ntBASIC18.35■□□□□ 0.53
BRCA2P51587 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC18.35■□□□□ 0.53
BRCA2P51587 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.34■□□□□ 0.53
BRCA2P51587 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BRCA2P51587 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.34■□□□□ 0.53
BRCA2P51587 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.34■□□□□ 0.53
BRCA2P51587 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BRCA2P51587 OLR1-203ENST00000432556 950 ntTSL 2 BASIC18.34■□□□□ 0.53
BRCA2P51587 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
BRCA2P51587 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
BRCA2P51587 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC18.34■□□□□ 0.53
BRCA2P51587 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BRCA2P51587 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
BRCA2P51587 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC18.34■□□□□ 0.53
BRCA2P51587 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
BRCA2P51587 FAM21FP-201ENST00000426241 1131 ntBASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms