Protein–RNA interactions for Protein: P51571

SSR4, Translocon-associated protein subunit delta, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P51571 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SSR4P51571 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SSR4P51571 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
SSR4P51571 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SSR4P51571 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.27■□□□□ 0.04
SSR4P51571 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SSR4P51571 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SSR4P51571 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SSR4P51571 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SSR4P51571 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SSR4P51571 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SSR4P51571 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.27■□□□□ 0.04
SSR4P51571 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SSR4P51571 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SSR4P51571 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SSR4P51571 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.27■□□□□ 0.04
SSR4P51571 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.27■□□□□ 0.04
SSR4P51571 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SSR4P51571 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
SSR4P51571 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SSR4P51571 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SSR4P51571 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.27■□□□□ 0.04
SSR4P51571 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.27■□□□□ 0.04
SSR4P51571 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
SSR4P51571 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.27■□□□□ 0.04
SSR4P51571 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SSR4P51571 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SSR4P51571 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.27■□□□□ 0.04
SSR4P51571 LINC01225-203ENST00000563550 1244 ntBASIC15.27■□□□□ 0.04
SSR4P51571 AC027796.2-201ENST00000575326 344 ntBASIC15.27■□□□□ 0.04
SSR4P51571 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.27■□□□□ 0.04
SSR4P51571 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.27■□□□□ 0.04
SSR4P51571 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.27■□□□□ 0.04
SSR4P51571 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.27■□□□□ 0.04
SSR4P51571 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15.27■□□□□ 0.04
SSR4P51571 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.27■□□□□ 0.04
SSR4P51571 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.27■□□□□ 0.03
SSR4P51571 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SSR4P51571 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
SSR4P51571 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
SSR4P51571 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SSR4P51571 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SSR4P51571 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
SSR4P51571 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.27■□□□□ 0.03
SSR4P51571 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
SSR4P51571 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SSR4P51571 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
SSR4P51571 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SSR4P51571 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SSR4P51571 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SSR4P51571 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SSR4P51571 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SSR4P51571 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.26■□□□□ 0.03
SSR4P51571 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SSR4P51571 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SSR4P51571 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
SSR4P51571 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SSR4P51571 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SSR4P51571 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SSR4P51571 AC005915.1-201ENST00000624912 2018 ntBASIC15.26■□□□□ 0.03
SSR4P51571 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SSR4P51571 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SSR4P51571 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SSR4P51571 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.26■□□□□ 0.03
SSR4P51571 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SSR4P51571 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SSR4P51571 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SSR4P51571 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SSR4P51571 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SSR4P51571 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.26■□□□□ 0.03
SSR4P51571 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.26■□□□□ 0.03
SSR4P51571 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.26■□□□□ 0.03
SSR4P51571 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC15.26■□□□□ 0.03
SSR4P51571 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
SSR4P51571 AC109322.1-201ENST00000524499 1264 ntBASIC15.26■□□□□ 0.03
SSR4P51571 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.26■□□□□ 0.03
SSR4P51571 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.26■□□□□ 0.03
SSR4P51571 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.26■□□□□ 0.03
SSR4P51571 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
SSR4P51571 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SSR4P51571 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.26■□□□□ 0.03
SSR4P51571 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SSR4P51571 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SSR4P51571 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
SSR4P51571 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SSR4P51571 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC15.26■□□□□ 0.03
SSR4P51571 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
SSR4P51571 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SSR4P51571 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SSR4P51571 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SSR4P51571 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SSR4P51571 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SSR4P51571 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SSR4P51571 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SSR4P51571 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SSR4P51571 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SSR4P51571 AC105020.1-201ENST00000435356 2205 ntBASIC15.25■□□□□ 0.03
SSR4P51571 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SSR4P51571 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SSR4P51571 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms