Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LHX1P48742 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
LHX1P48742 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.62■□□□□ 0.41
LHX1P48742 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
LHX1P48742 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LHX1P48742 PRYP6-201ENST00000514804 343 ntBASIC17.62■□□□□ 0.41
LHX1P48742 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LHX1P48742 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LHX1P48742 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LHX1P48742 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.62■□□□□ 0.41
LHX1P48742 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.62■□□□□ 0.41
LHX1P48742 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
LHX1P48742 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LHX1P48742 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LHX1P48742 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.62■□□□□ 0.41
LHX1P48742 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
LHX1P48742 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LHX1P48742 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LHX1P48742 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LHX1P48742 AC078925.2-201ENST00000624013 1973 ntBASIC17.62■□□□□ 0.41
LHX1P48742 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
LHX1P48742 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
LHX1P48742 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.62■□□□□ 0.41
LHX1P48742 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
LHX1P48742 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.62■□□□□ 0.41
LHX1P48742 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LHX1P48742 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
LHX1P48742 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LHX1P48742 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.61■□□□□ 0.41
LHX1P48742 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
LHX1P48742 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LHX1P48742 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
LHX1P48742 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
LHX1P48742 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LHX1P48742 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
LHX1P48742 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.61■□□□□ 0.41
LHX1P48742 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
LHX1P48742 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
LHX1P48742 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LHX1P48742 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
LHX1P48742 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.61■□□□□ 0.41
LHX1P48742 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.61■□□□□ 0.41
LHX1P48742 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.61■□□□□ 0.41
LHX1P48742 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.61■□□□□ 0.41
LHX1P48742 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.61■□□□□ 0.41
LHX1P48742 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
LHX1P48742 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LHX1P48742 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
LHX1P48742 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LHX1P48742 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LHX1P48742 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LHX1P48742 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LHX1P48742 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LHX1P48742 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LHX1P48742 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LHX1P48742 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LHX1P48742 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LHX1P48742 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
LHX1P48742 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LHX1P48742 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LHX1P48742 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
LHX1P48742 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LHX1P48742 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.6■□□□□ 0.41
LHX1P48742 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.6■□□□□ 0.41
LHX1P48742 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.6■□□□□ 0.41
LHX1P48742 AL645939.2-201ENST00000427340 991 ntBASIC17.6■□□□□ 0.41
LHX1P48742 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.6■□□□□ 0.41
LHX1P48742 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.6■□□□□ 0.41
LHX1P48742 SLC25A39P2-201ENST00000537614 270 ntBASIC17.6■□□□□ 0.41
LHX1P48742 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.6■□□□□ 0.41
LHX1P48742 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LHX1P48742 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LHX1P48742 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
LHX1P48742 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LHX1P48742 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.6■□□□□ 0.41
LHX1P48742 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.6■□□□□ 0.41
LHX1P48742 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.6■□□□□ 0.41
LHX1P48742 AC073439.1-201ENST00000624121 1774 ntBASIC17.6■□□□□ 0.41
LHX1P48742 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LHX1P48742 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LHX1P48742 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
LHX1P48742 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
LHX1P48742 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LHX1P48742 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
LHX1P48742 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
LHX1P48742 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LHX1P48742 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.6■□□□□ 0.41
LHX1P48742 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
LHX1P48742 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LHX1P48742 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LHX1P48742 RNF216P1-203ENST00000404404 2427 ntBASIC17.59■□□□□ 0.41
LHX1P48742 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.59■□□□□ 0.41
LHX1P48742 GGT4P-201ENST00000623672 1708 ntBASIC17.59■□□□□ 0.41
LHX1P48742 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
LHX1P48742 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
LHX1P48742 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LHX1P48742 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.59■□□□□ 0.41
LHX1P48742 GPS2P2-201ENST00000430745 888 ntBASIC17.59■□□□□ 0.41
LHX1P48742 RBPMS2P1-201ENST00000437762 623 ntBASIC17.59■□□□□ 0.41
LHX1P48742 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms