Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CEACAM3P40198 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CEACAM3P40198 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CEACAM3P40198 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CEACAM3P40198 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CEACAM3P40198 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CEACAM3P40198 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CEACAM3P40198 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CEACAM3P40198 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CEACAM3P40198 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC13.65□□□□□ -0.22
CEACAM3P40198 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CEACAM3P40198 WDR53-204ENST00000433160 887 ntTSL 5 BASIC13.65□□□□□ -0.22
CEACAM3P40198 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CEACAM3P40198 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CEACAM3P40198 SLC25A1P1-201ENST00000528351 927 ntBASIC13.65□□□□□ -0.22
CEACAM3P40198 AL031432.2-201ENST00000566714 459 ntBASIC13.65□□□□□ -0.22
CEACAM3P40198 AL928711.1-201ENST00000570165 459 ntBASIC13.65□□□□□ -0.22
CEACAM3P40198 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC13.65□□□□□ -0.22
CEACAM3P40198 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC13.65□□□□□ -0.22
CEACAM3P40198 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CEACAM3P40198 NME4-212ENST00000621774 904 ntTSL 3 BASIC13.65□□□□□ -0.22
CEACAM3P40198 AL139011.1-202ENST00000642063 584 ntBASIC13.65□□□□□ -0.22
CEACAM3P40198 AC105020.1-201ENST00000435356 2205 ntBASIC13.65□□□□□ -0.22
CEACAM3P40198 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CEACAM3P40198 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CEACAM3P40198 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CEACAM3P40198 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CEACAM3P40198 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC13.65□□□□□ -0.22
CEACAM3P40198 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC13.65□□□□□ -0.22
CEACAM3P40198 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CEACAM3P40198 AL391256.1-201ENST00000443260 1855 ntBASIC13.65□□□□□ -0.22
CEACAM3P40198 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CEACAM3P40198 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CEACAM3P40198 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CEACAM3P40198 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC13.65□□□□□ -0.22
CEACAM3P40198 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CEACAM3P40198 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC13.65□□□□□ -0.22
CEACAM3P40198 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CEACAM3P40198 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CEACAM3P40198 PCDHB17P-201ENST00000539533 2393 ntBASIC13.65□□□□□ -0.22
CEACAM3P40198 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC13.65□□□□□ -0.22
CEACAM3P40198 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC13.65□□□□□ -0.22
CEACAM3P40198 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CEACAM3P40198 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.23
CEACAM3P40198 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
CEACAM3P40198 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CEACAM3P40198 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CEACAM3P40198 AC006277.1-201ENST00000624348 1610 ntBASIC13.64□□□□□ -0.23
CEACAM3P40198 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CEACAM3P40198 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
CEACAM3P40198 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CEACAM3P40198 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC13.64□□□□□ -0.23
CEACAM3P40198 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC13.64□□□□□ -0.23
CEACAM3P40198 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CEACAM3P40198 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CEACAM3P40198 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CEACAM3P40198 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CEACAM3P40198 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CEACAM3P40198 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CEACAM3P40198 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CEACAM3P40198 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
CEACAM3P40198 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CEACAM3P40198 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC13.64□□□□□ -0.23
CEACAM3P40198 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CEACAM3P40198 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
CEACAM3P40198 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CEACAM3P40198 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CEACAM3P40198 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC13.64□□□□□ -0.23
CEACAM3P40198 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
CEACAM3P40198 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CEACAM3P40198 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
CEACAM3P40198 HNRNPA1P28-201ENST00000424481 961 ntBASIC13.64□□□□□ -0.23
CEACAM3P40198 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC13.64□□□□□ -0.23
CEACAM3P40198 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CEACAM3P40198 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC13.64□□□□□ -0.23
CEACAM3P40198 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC13.64□□□□□ -0.23
CEACAM3P40198 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC13.64□□□□□ -0.23
CEACAM3P40198 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC13.64□□□□□ -0.23
CEACAM3P40198 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CEACAM3P40198 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC13.64□□□□□ -0.23
CEACAM3P40198 AC140113.2-201ENST00000604370 208 ntBASIC13.64□□□□□ -0.23
CEACAM3P40198 WT1-AS_2.1-201ENST00000613208 137 ntBASIC13.64□□□□□ -0.23
CEACAM3P40198 AC010507.1-201ENST00000633895 436 ntBASIC13.64□□□□□ -0.23
CEACAM3P40198 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CEACAM3P40198 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CEACAM3P40198 AC005915.1-201ENST00000624912 2018 ntBASIC13.64□□□□□ -0.23
CEACAM3P40198 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC13.64□□□□□ -0.23
CEACAM3P40198 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CEACAM3P40198 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC13.64□□□□□ -0.23
CEACAM3P40198 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC13.64□□□□□ -0.23
CEACAM3P40198 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CEACAM3P40198 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CEACAM3P40198 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC13.64□□□□□ -0.23
CEACAM3P40198 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CEACAM3P40198 AC063926.3-201ENST00000624734 5658 ntBASIC13.64□□□□□ -0.23
CEACAM3P40198 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CEACAM3P40198 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CEACAM3P40198 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CEACAM3P40198 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CEACAM3P40198 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms