Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 SPDYE17-201ENST00000412399 783 ntBASIC20.75■□□□□ 0.91
RFC4P35249 AC245100.3-201ENST00000441281 285 ntBASIC20.75■□□□□ 0.91
RFC4P35249 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC20.75■□□□□ 0.91
RFC4P35249 AL589987.1-201ENST00000453380 819 ntBASIC20.75■□□□□ 0.91
RFC4P35249 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RFC4P35249 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC20.75■□□□□ 0.91
RFC4P35249 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RFC4P35249 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RFC4P35249 AP005482.1-201ENST00000563722 1273 ntBASIC20.75■□□□□ 0.91
RFC4P35249 AL606495.2-201ENST00000605867 535 ntBASIC20.75■□□□□ 0.91
RFC4P35249 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC20.75■□□□□ 0.91
RFC4P35249 COX11-210ENST00000639671 696 ntBASIC20.75■□□□□ 0.91
RFC4P35249 AC135050.7-201ENST00000624508 2218 ntBASIC20.75■□□□□ 0.91
RFC4P35249 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RFC4P35249 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFC4P35249 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RFC4P35249 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RFC4P35249 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
RFC4P35249 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
RFC4P35249 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RFC4P35249 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RFC4P35249 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
RFC4P35249 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFC4P35249 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
RFC4P35249 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
RFC4P35249 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
RFC4P35249 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFC4P35249 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFC4P35249 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFC4P35249 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFC4P35249 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC20.74■□□□□ 0.91
RFC4P35249 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC20.74■□□□□ 0.91
RFC4P35249 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFC4P35249 VMO1-203ENST00000416307 712 ntTSL 2 BASIC20.74■□□□□ 0.91
RFC4P35249 AC098850.1-201ENST00000419919 790 ntBASIC20.74■□□□□ 0.91
RFC4P35249 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFC4P35249 AC007389.4-201ENST00000454674 793 ntBASIC20.74■□□□□ 0.91
RFC4P35249 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC20.74■□□□□ 0.91
RFC4P35249 AC119751.2-201ENST00000504529 210 ntBASIC20.74■□□□□ 0.91
RFC4P35249 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC20.74■□□□□ 0.91
RFC4P35249 FTH1-202ENST00000526640 786 ntTSL 2 BASIC20.74■□□□□ 0.91
RFC4P35249 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC20.74■□□□□ 0.91
RFC4P35249 AC124947.2-201ENST00000547118 1133 ntBASIC20.74■□□□□ 0.91
RFC4P35249 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC20.74■□□□□ 0.91
RFC4P35249 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC20.74■□□□□ 0.91
RFC4P35249 AC093726.1-201ENST00000608064 963 ntBASIC20.74■□□□□ 0.91
RFC4P35249 MIR6069-201ENST00000620069 79 ntBASIC20.74■□□□□ 0.91
RFC4P35249 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFC4P35249 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFC4P35249 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFC4P35249 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFC4P35249 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFC4P35249 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFC4P35249 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFC4P35249 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
RFC4P35249 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFC4P35249 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFC4P35249 LINC02012-201ENST00000608206 1725 ntBASIC20.73■□□□□ 0.91
RFC4P35249 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
RFC4P35249 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
RFC4P35249 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC20.73■□□□□ 0.91
RFC4P35249 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFC4P35249 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC20.73■□□□□ 0.91
RFC4P35249 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFC4P35249 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
RFC4P35249 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFC4P35249 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RFC4P35249 SNX33P1-201ENST00000592116 1762 ntBASIC20.73■□□□□ 0.91
RFC4P35249 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
RFC4P35249 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFC4P35249 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFC4P35249 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFC4P35249 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFC4P35249 HIST1H2BPS3-201ENST00000419683 341 ntBASIC20.73■□□□□ 0.91
RFC4P35249 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC20.73■□□□□ 0.91
RFC4P35249 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC20.73■□□□□ 0.91
RFC4P35249 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC20.73■□□□□ 0.91
RFC4P35249 AC092552.1-201ENST00000547243 906 ntBASIC20.73■□□□□ 0.91
RFC4P35249 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC20.73■□□□□ 0.91
RFC4P35249 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC20.73■□□□□ 0.91
RFC4P35249 AC061975.2-201ENST00000581722 295 ntBASIC20.73■□□□□ 0.91
RFC4P35249 AC133552.6-201ENST00000613406 534 ntBASIC20.73■□□□□ 0.91
RFC4P35249 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
RFC4P35249 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.73■□□□□ 0.91
RFC4P35249 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
RFC4P35249 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
RFC4P35249 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RFC4P35249 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.73■□□□□ 0.91
RFC4P35249 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
RFC4P35249 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFC4P35249 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFC4P35249 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.73■□□□□ 0.91
RFC4P35249 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFC4P35249 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC20.73■□□□□ 0.91
RFC4P35249 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
RFC4P35249 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RFC4P35249 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RFC4P35249 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RFC4P35249 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RFC4P35249 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms