Protein–RNA interactions for Protein: P18615

NELFE, Negative elongation factor E, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFEP18615 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
NELFEP18615 AC002347.1-201ENST00000569543 541 ntBASIC16.58■□□□□ 0.24
NELFEP18615 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
NELFEP18615 AC004790.2-201ENST00000623588 572 ntBASIC16.58■□□□□ 0.24
NELFEP18615 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NELFEP18615 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NELFEP18615 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.58■□□□□ 0.24
NELFEP18615 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.58■□□□□ 0.24
NELFEP18615 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NELFEP18615 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NELFEP18615 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
NELFEP18615 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NELFEP18615 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
NELFEP18615 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.58■□□□□ 0.24
NELFEP18615 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NELFEP18615 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NELFEP18615 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
NELFEP18615 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NELFEP18615 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
NELFEP18615 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NELFEP18615 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NELFEP18615 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
NELFEP18615 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NELFEP18615 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.57■□□□□ 0.24
NELFEP18615 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NELFEP18615 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NELFEP18615 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NELFEP18615 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NELFEP18615 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.57■□□□□ 0.24
NELFEP18615 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NELFEP18615 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
NELFEP18615 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.57■□□□□ 0.24
NELFEP18615 AC005915.1-201ENST00000624912 2018 ntBASIC16.57■□□□□ 0.24
NELFEP18615 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NELFEP18615 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NELFEP18615 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NELFEP18615 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NELFEP18615 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NELFEP18615 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NELFEP18615 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NELFEP18615 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.57■□□□□ 0.24
NELFEP18615 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
NELFEP18615 YBX2P1-201ENST00000394192 760 ntBASIC16.57■□□□□ 0.24
NELFEP18615 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.57■□□□□ 0.24
NELFEP18615 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NELFEP18615 UPF3AP3-201ENST00000420996 769 ntBASIC16.57■□□□□ 0.24
NELFEP18615 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.57■□□□□ 0.24
NELFEP18615 DNAJB3-201ENST00000446806 729 ntBASIC16.57■□□□□ 0.24
NELFEP18615 KRT18P2-201ENST00000447938 1258 ntBASIC16.57■□□□□ 0.24
NELFEP18615 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.57■□□□□ 0.24
NELFEP18615 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
NELFEP18615 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.57■□□□□ 0.24
NELFEP18615 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.57■□□□□ 0.24
NELFEP18615 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.57■□□□□ 0.24
NELFEP18615 AL139327.4-201ENST00000612362 153 ntBASIC16.57■□□□□ 0.24
NELFEP18615 GGTLC5P-201ENST00000617623 998 ntBASIC16.57■□□□□ 0.24
NELFEP18615 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.57■□□□□ 0.24
NELFEP18615 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NELFEP18615 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NELFEP18615 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.57■□□□□ 0.24
NELFEP18615 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
NELFEP18615 AL662844.4-201ENST00000606367 2838 ntBASIC16.57■□□□□ 0.24
NELFEP18615 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
NELFEP18615 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NELFEP18615 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NELFEP18615 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
NELFEP18615 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
NELFEP18615 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.57■□□□□ 0.24
NELFEP18615 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
NELFEP18615 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NELFEP18615 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
NELFEP18615 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.56■□□□□ 0.24
NELFEP18615 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NELFEP18615 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.56■□□□□ 0.24
NELFEP18615 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
NELFEP18615 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NELFEP18615 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
NELFEP18615 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NELFEP18615 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
NELFEP18615 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
NELFEP18615 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NELFEP18615 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NELFEP18615 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
NELFEP18615 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NELFEP18615 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NELFEP18615 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NELFEP18615 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
NELFEP18615 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NELFEP18615 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
NELFEP18615 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NELFEP18615 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NELFEP18615 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
NELFEP18615 AC023274.1-201ENST00000418278 595 ntBASIC16.56■□□□□ 0.24
NELFEP18615 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.56■□□□□ 0.24
NELFEP18615 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.56■□□□□ 0.24
NELFEP18615 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.56■□□□□ 0.24
NELFEP18615 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.56■□□□□ 0.24
NELFEP18615 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NELFEP18615 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
NELFEP18615 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms