Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 RHOQP3-201ENST00000437982 621 ntBASIC17.51■□□□□ 0.39
PDGFRAP16234 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PDGFRAP16234 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDGFRAP16234 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PDGFRAP16234 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.51■□□□□ 0.39
PDGFRAP16234 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PDGFRAP16234 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.51■□□□□ 0.39
PDGFRAP16234 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.51■□□□□ 0.39
PDGFRAP16234 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PDGFRAP16234 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.51■□□□□ 0.39
PDGFRAP16234 AC092865.5-201ENST00000545435 363 ntBASIC17.51■□□□□ 0.39
PDGFRAP16234 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.51■□□□□ 0.39
PDGFRAP16234 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.51■□□□□ 0.39
PDGFRAP16234 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.51■□□□□ 0.39
PDGFRAP16234 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.51■□□□□ 0.39
PDGFRAP16234 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
PDGFRAP16234 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PDGFRAP16234 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
PDGFRAP16234 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PDGFRAP16234 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PDGFRAP16234 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.51■□□□□ 0.39
PDGFRAP16234 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDGFRAP16234 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDGFRAP16234 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDGFRAP16234 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDGFRAP16234 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.51■□□□□ 0.39
PDGFRAP16234 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PDGFRAP16234 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDGFRAP16234 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDGFRAP16234 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
PDGFRAP16234 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDGFRAP16234 ALOX12P2-203ENST00000570921 1945 ntBASIC17.51■□□□□ 0.39
PDGFRAP16234 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
PDGFRAP16234 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
PDGFRAP16234 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDGFRAP16234 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDGFRAP16234 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
PDGFRAP16234 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
PDGFRAP16234 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDGFRAP16234 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PDGFRAP16234 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.5■□□□□ 0.39
PDGFRAP16234 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
PDGFRAP16234 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.5■□□□□ 0.39
PDGFRAP16234 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDGFRAP16234 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.5■□□□□ 0.39
PDGFRAP16234 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
PDGFRAP16234 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.5■□□□□ 0.39
PDGFRAP16234 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.5■□□□□ 0.39
PDGFRAP16234 HMGA1P7-201ENST00000406908 502 ntBASIC17.5■□□□□ 0.39
PDGFRAP16234 BX842568.4-201ENST00000421222 227 ntBASIC17.5■□□□□ 0.39
PDGFRAP16234 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.5■□□□□ 0.39
PDGFRAP16234 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.5■□□□□ 0.39
PDGFRAP16234 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.5■□□□□ 0.39
PDGFRAP16234 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.5■□□□□ 0.39
PDGFRAP16234 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.5■□□□□ 0.39
PDGFRAP16234 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.5■□□□□ 0.39
PDGFRAP16234 AC040169.1-201ENST00000565382 521 ntBASIC17.5■□□□□ 0.39
PDGFRAP16234 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.5■□□□□ 0.39
PDGFRAP16234 AL645728.2-201ENST00000641974 660 ntBASIC17.5■□□□□ 0.39
PDGFRAP16234 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDGFRAP16234 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.5■□□□□ 0.39
PDGFRAP16234 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
PDGFRAP16234 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDGFRAP16234 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
PDGFRAP16234 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDGFRAP16234 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PDGFRAP16234 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
PDGFRAP16234 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDGFRAP16234 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDGFRAP16234 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDGFRAP16234 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
PDGFRAP16234 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
PDGFRAP16234 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDGFRAP16234 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.5■□□□□ 0.39
PDGFRAP16234 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDGFRAP16234 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDGFRAP16234 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
PDGFRAP16234 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PDGFRAP16234 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PDGFRAP16234 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDGFRAP16234 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDGFRAP16234 AL031731.1-201ENST00000642131 2094 ntBASIC17.49■□□□□ 0.39
PDGFRAP16234 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.49■□□□□ 0.39
PDGFRAP16234 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDGFRAP16234 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDGFRAP16234 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDGFRAP16234 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.49■□□□□ 0.39
PDGFRAP16234 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PDGFRAP16234 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.49■□□□□ 0.39
PDGFRAP16234 PCDHB19P-201ENST00000570871 2371 ntBASIC17.49■□□□□ 0.39
PDGFRAP16234 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PDGFRAP16234 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDGFRAP16234 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PDGFRAP16234 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PDGFRAP16234 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDGFRAP16234 AL031432.2-201ENST00000566714 459 ntBASIC17.49■□□□□ 0.39
PDGFRAP16234 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.49■□□□□ 0.39
PDGFRAP16234 AL928711.1-201ENST00000570165 459 ntBASIC17.49■□□□□ 0.39
PDGFRAP16234 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDGFRAP16234 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms