Protein–RNA interactions for Protein: P0C5Y9

H2AFB1, Histone H2A-Bbd type 1, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFB1P0C5Y9 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
H2AFB1P0C5Y9 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
H2AFB1P0C5Y9 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
H2AFB1P0C5Y9 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
H2AFB1P0C5Y9 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
H2AFB1P0C5Y9 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
H2AFB1P0C5Y9 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
H2AFB1P0C5Y9 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
H2AFB1P0C5Y9 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
H2AFB1P0C5Y9 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
H2AFB1P0C5Y9 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.52□□□□□ -0.24
H2AFB1P0C5Y9 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
H2AFB1P0C5Y9 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
H2AFB1P0C5Y9 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.52□□□□□ -0.24
H2AFB1P0C5Y9 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
H2AFB1P0C5Y9 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
H2AFB1P0C5Y9 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
H2AFB1P0C5Y9 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
H2AFB1P0C5Y9 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC13.52□□□□□ -0.25
H2AFB1P0C5Y9 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
H2AFB1P0C5Y9 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC13.52□□□□□ -0.25
H2AFB1P0C5Y9 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC13.52□□□□□ -0.25
H2AFB1P0C5Y9 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC13.52□□□□□ -0.25
H2AFB1P0C5Y9 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC13.52□□□□□ -0.25
H2AFB1P0C5Y9 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC13.52□□□□□ -0.25
H2AFB1P0C5Y9 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
H2AFB1P0C5Y9 AC133041.1-202ENST00000642053 222 ntBASIC13.52□□□□□ -0.25
H2AFB1P0C5Y9 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
H2AFB1P0C5Y9 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
H2AFB1P0C5Y9 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
H2AFB1P0C5Y9 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
H2AFB1P0C5Y9 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
H2AFB1P0C5Y9 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC13.52□□□□□ -0.25
H2AFB1P0C5Y9 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
H2AFB1P0C5Y9 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC13.52□□□□□ -0.25
H2AFB1P0C5Y9 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
H2AFB1P0C5Y9 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
H2AFB1P0C5Y9 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC13.52□□□□□ -0.25
H2AFB1P0C5Y9 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.52□□□□□ -0.25
H2AFB1P0C5Y9 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.52□□□□□ -0.25
H2AFB1P0C5Y9 AP005117.1-202ENST00000581724 1908 ntBASIC13.52□□□□□ -0.25
H2AFB1P0C5Y9 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
H2AFB1P0C5Y9 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.52□□□□□ -0.25
H2AFB1P0C5Y9 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
H2AFB1P0C5Y9 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
H2AFB1P0C5Y9 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
H2AFB1P0C5Y9 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
H2AFB1P0C5Y9 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
H2AFB1P0C5Y9 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
H2AFB1P0C5Y9 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.51□□□□□ -0.25
H2AFB1P0C5Y9 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
H2AFB1P0C5Y9 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
H2AFB1P0C5Y9 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
H2AFB1P0C5Y9 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.51□□□□□ -0.25
H2AFB1P0C5Y9 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
H2AFB1P0C5Y9 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.51□□□□□ -0.25
H2AFB1P0C5Y9 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
H2AFB1P0C5Y9 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
H2AFB1P0C5Y9 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
H2AFB1P0C5Y9 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
H2AFB1P0C5Y9 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC13.51□□□□□ -0.25
H2AFB1P0C5Y9 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
H2AFB1P0C5Y9 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
H2AFB1P0C5Y9 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC13.51□□□□□ -0.25
H2AFB1P0C5Y9 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
H2AFB1P0C5Y9 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
H2AFB1P0C5Y9 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
H2AFB1P0C5Y9 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC13.51□□□□□ -0.25
H2AFB1P0C5Y9 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
H2AFB1P0C5Y9 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
H2AFB1P0C5Y9 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
H2AFB1P0C5Y9 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
H2AFB1P0C5Y9 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC13.51□□□□□ -0.25
H2AFB1P0C5Y9 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
H2AFB1P0C5Y9 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
H2AFB1P0C5Y9 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
H2AFB1P0C5Y9 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
H2AFB1P0C5Y9 ILF2-202ENST00000368681 726 ntTSL 2 BASIC13.51□□□□□ -0.25
H2AFB1P0C5Y9 MYCLP1-201ENST00000372451 1075 ntBASIC13.51□□□□□ -0.25
H2AFB1P0C5Y9 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC13.51□□□□□ -0.25
H2AFB1P0C5Y9 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
H2AFB1P0C5Y9 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
H2AFB1P0C5Y9 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC13.51□□□□□ -0.25
H2AFB1P0C5Y9 AP003097.1-201ENST00000530657 1135 ntBASIC13.51□□□□□ -0.25
H2AFB1P0C5Y9 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC13.51□□□□□ -0.25
H2AFB1P0C5Y9 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC13.51□□□□□ -0.25
H2AFB1P0C5Y9 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC13.51□□□□□ -0.25
H2AFB1P0C5Y9 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC13.51□□□□□ -0.25
H2AFB1P0C5Y9 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC13.51□□□□□ -0.25
H2AFB1P0C5Y9 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC13.51□□□□□ -0.25
H2AFB1P0C5Y9 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
H2AFB1P0C5Y9 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
H2AFB1P0C5Y9 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
H2AFB1P0C5Y9 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.51□□□□□ -0.25
H2AFB1P0C5Y9 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
H2AFB1P0C5Y9 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.51□□□□□ -0.25
H2AFB1P0C5Y9 AC010491.1-201ENST00000563101 2797 ntBASIC13.51□□□□□ -0.25
H2AFB1P0C5Y9 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
H2AFB1P0C5Y9 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
H2AFB1P0C5Y9 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms