Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
HOXC6P09630 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC18.7■□□□□ 0.58
HOXC6P09630 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
HOXC6P09630 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.69■□□□□ 0.58
HOXC6P09630 AL671710.1-201ENST00000610245 2349 ntBASIC18.69■□□□□ 0.58
HOXC6P09630 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.69■□□□□ 0.58
HOXC6P09630 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
HOXC6P09630 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
HOXC6P09630 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HOXC6P09630 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
HOXC6P09630 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HOXC6P09630 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HOXC6P09630 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
HOXC6P09630 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC18.69■□□□□ 0.58
HOXC6P09630 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HOXC6P09630 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.69■□□□□ 0.58
HOXC6P09630 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.69■□□□□ 0.58
HOXC6P09630 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HOXC6P09630 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.69■□□□□ 0.58
HOXC6P09630 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
HOXC6P09630 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HOXC6P09630 AP006294.1-201ENST00000415407 339 ntBASIC18.69■□□□□ 0.58
HOXC6P09630 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC18.69■□□□□ 0.58
HOXC6P09630 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
HOXC6P09630 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC18.69■□□□□ 0.58
HOXC6P09630 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC18.69■□□□□ 0.58
HOXC6P09630 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC18.69■□□□□ 0.58
HOXC6P09630 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC18.69■□□□□ 0.58
HOXC6P09630 RN7SL618P-201ENST00000477850 296 ntBASIC18.69■□□□□ 0.58
HOXC6P09630 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
HOXC6P09630 AL512361.1-201ENST00000554200 418 ntBASIC18.69■□□□□ 0.58
HOXC6P09630 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC18.69■□□□□ 0.58
HOXC6P09630 AC106886.1-201ENST00000568660 600 ntBASIC18.69■□□□□ 0.58
HOXC6P09630 IFT20-216ENST00000588477 774 ntTSL 5 BASIC18.69■□□□□ 0.58
HOXC6P09630 AL162274.1-201ENST00000617191 1098 ntBASIC18.69■□□□□ 0.58
HOXC6P09630 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC18.69■□□□□ 0.58
HOXC6P09630 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
HOXC6P09630 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
HOXC6P09630 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
HOXC6P09630 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
HOXC6P09630 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
HOXC6P09630 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HOXC6P09630 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC18.69■□□□□ 0.58
HOXC6P09630 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
HOXC6P09630 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
HOXC6P09630 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HOXC6P09630 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HOXC6P09630 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HOXC6P09630 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.69■□□□□ 0.58
HOXC6P09630 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
HOXC6P09630 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.69■□□□□ 0.58
HOXC6P09630 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.69■□□□□ 0.58
HOXC6P09630 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.68■□□□□ 0.58
HOXC6P09630 SNX33P1-201ENST00000592116 1762 ntBASIC18.68■□□□□ 0.58
HOXC6P09630 KRT8P39-201ENST00000396270 1433 ntBASIC18.68■□□□□ 0.58
HOXC6P09630 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HOXC6P09630 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HOXC6P09630 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
HOXC6P09630 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HOXC6P09630 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HOXC6P09630 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HOXC6P09630 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
HOXC6P09630 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
HOXC6P09630 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC18.68■□□□□ 0.58
HOXC6P09630 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
HOXC6P09630 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HOXC6P09630 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC18.68■□□□□ 0.58
HOXC6P09630 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HOXC6P09630 AL512384.1-201ENST00000406683 331 ntBASIC18.68■□□□□ 0.58
HOXC6P09630 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC18.68■□□□□ 0.58
HOXC6P09630 AC114501.2-201ENST00000439631 535 ntBASIC18.68■□□□□ 0.58
HOXC6P09630 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC18.68■□□□□ 0.58
HOXC6P09630 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC18.68■□□□□ 0.58
HOXC6P09630 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
HOXC6P09630 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC18.68■□□□□ 0.58
HOXC6P09630 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
HOXC6P09630 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
HOXC6P09630 AC141586.5-201ENST00000624546 2050 ntBASIC18.68■□□□□ 0.58
HOXC6P09630 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HOXC6P09630 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HOXC6P09630 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
HOXC6P09630 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
HOXC6P09630 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HOXC6P09630 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC18.68■□□□□ 0.58
HOXC6P09630 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
HOXC6P09630 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
HOXC6P09630 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HOXC6P09630 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.67■□□□□ 0.58
HOXC6P09630 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.67■□□□□ 0.58
HOXC6P09630 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
HOXC6P09630 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.67■□□□□ 0.58
HOXC6P09630 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HOXC6P09630 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HOXC6P09630 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HOXC6P09630 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
HOXC6P09630 DPM2-202ENST00000373110 738 ntTSL 2 BASIC18.67■□□□□ 0.58
HOXC6P09630 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HOXC6P09630 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
HOXC6P09630 AC079776.1-201ENST00000401540 1152 ntBASIC18.67■□□□□ 0.58
HOXC6P09630 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms