Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 AC092183.1-201ENST00000469884 875 ntBASIC19.99■□□□□ 0.79
CHGBP05060 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC19.99■□□□□ 0.79
CHGBP05060 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC19.99■□□□□ 0.79
CHGBP05060 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC19.99■□□□□ 0.79
CHGBP05060 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC19.99■□□□□ 0.79
CHGBP05060 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CHGBP05060 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHGBP05060 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CHGBP05060 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHGBP05060 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHGBP05060 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC19.99■□□□□ 0.79
CHGBP05060 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC19.99■□□□□ 0.79
CHGBP05060 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHGBP05060 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHGBP05060 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC19.99■□□□□ 0.79
CHGBP05060 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHGBP05060 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHGBP05060 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CHGBP05060 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHGBP05060 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CHGBP05060 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHGBP05060 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC19.98■□□□□ 0.79
CHGBP05060 OS9-205ENST00000413095 1660 ntTSL 2 BASIC19.98■□□□□ 0.79
CHGBP05060 GGT3P-204ENST00000453783 1664 ntBASIC19.98■□□□□ 0.79
CHGBP05060 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
CHGBP05060 ACTG1P14-201ENST00000446382 1122 ntBASIC19.98■□□□□ 0.79
CHGBP05060 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC19.98■□□□□ 0.79
CHGBP05060 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC19.98■□□□□ 0.79
CHGBP05060 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC19.98■□□□□ 0.79
CHGBP05060 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC19.98■□□□□ 0.79
CHGBP05060 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC19.98■□□□□ 0.79
CHGBP05060 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CHGBP05060 LINC02199-201ENST00000506655 2702 ntBASIC19.98■□□□□ 0.79
CHGBP05060 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
CHGBP05060 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC19.98■□□□□ 0.79
CHGBP05060 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CHGBP05060 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CHGBP05060 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHGBP05060 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC19.98■□□□□ 0.79
CHGBP05060 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHGBP05060 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC19.98■□□□□ 0.79
CHGBP05060 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHGBP05060 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHGBP05060 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHGBP05060 WT1-209ENST00000530998 2421 ntTSL 2 BASIC19.97■□□□□ 0.79
CHGBP05060 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHGBP05060 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
CHGBP05060 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
CHGBP05060 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CHGBP05060 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHGBP05060 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
CHGBP05060 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHGBP05060 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC19.97■□□□□ 0.79
CHGBP05060 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHGBP05060 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHGBP05060 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CHGBP05060 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CHGBP05060 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHGBP05060 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC19.97■□□□□ 0.79
CHGBP05060 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC19.97■□□□□ 0.79
CHGBP05060 STARD13-205ENST00000439831 945 ntTSL 2 BASIC19.97■□□□□ 0.79
CHGBP05060 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CHGBP05060 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC19.97■□□□□ 0.79
CHGBP05060 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC19.97■□□□□ 0.79
CHGBP05060 AP002490.2-201ENST00000524791 560 ntBASIC19.97■□□□□ 0.79
CHGBP05060 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC19.97■□□□□ 0.79
CHGBP05060 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC19.97■□□□□ 0.79
CHGBP05060 METTL23-205ENST00000588302 925 ntTSL 5 BASIC19.97■□□□□ 0.79
CHGBP05060 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC19.97■□□□□ 0.79
CHGBP05060 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHGBP05060 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CHGBP05060 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
CHGBP05060 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHGBP05060 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC19.97■□□□□ 0.79
CHGBP05060 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CHGBP05060 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
CHGBP05060 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CHGBP05060 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC19.97■□□□□ 0.79
CHGBP05060 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
CHGBP05060 GOLGA6L17P-202ENST00000614358 1398 ntBASIC19.96■□□□□ 0.79
CHGBP05060 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CHGBP05060 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHGBP05060 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CHGBP05060 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CHGBP05060 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC19.96■□□□□ 0.79
CHGBP05060 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC19.96■□□□□ 0.79
CHGBP05060 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHGBP05060 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CHGBP05060 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHGBP05060 AC254562.1-201ENST00000417586 456 ntBASIC19.96■□□□□ 0.79
CHGBP05060 GPS2P2-201ENST00000430745 888 ntBASIC19.96■□□□□ 0.79
CHGBP05060 SPDYE11-202ENST00000450699 704 ntBASIC19.96■□□□□ 0.79
CHGBP05060 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC19.96■□□□□ 0.79
CHGBP05060 RNF34-208ENST00000555076 593 ntTSL 3 BASIC19.96■□□□□ 0.79
CHGBP05060 SPDYE9P-201ENST00000570642 692 ntBASIC19.96■□□□□ 0.79
CHGBP05060 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHGBP05060 SPDYE10P-202ENST00000612005 668 ntBASIC19.96■□□□□ 0.79
CHGBP05060 SPDYE8P-202ENST00000612377 668 ntBASIC19.96■□□□□ 0.79
CHGBP05060 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC19.96■□□□□ 0.79
CHGBP05060 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms