Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MT-ND3P03897 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.08■□□□□ 0.32
MT-ND3P03897 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MT-ND3P03897 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
MT-ND3P03897 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MT-ND3P03897 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
MT-ND3P03897 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.08■□□□□ 0.32
MT-ND3P03897 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
MT-ND3P03897 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
MT-ND3P03897 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
MT-ND3P03897 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MT-ND3P03897 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
MT-ND3P03897 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
MT-ND3P03897 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
MT-ND3P03897 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.07■□□□□ 0.32
MT-ND3P03897 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
MT-ND3P03897 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
MT-ND3P03897 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
MT-ND3P03897 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
MT-ND3P03897 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MT-ND3P03897 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
MT-ND3P03897 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
MT-ND3P03897 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
MT-ND3P03897 MRPL3P1-201ENST00000400109 1033 ntBASIC17.07■□□□□ 0.32
MT-ND3P03897 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.07■□□□□ 0.32
MT-ND3P03897 FAM197Y8-203ENST00000450145 560 ntBASIC17.07■□□□□ 0.32
MT-ND3P03897 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.07■□□□□ 0.32
MT-ND3P03897 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
MT-ND3P03897 AP001005.1-201ENST00000571755 1248 ntBASIC17.07■□□□□ 0.32
MT-ND3P03897 AL773604.1-201ENST00000617417 272 ntBASIC17.07■□□□□ 0.32
MT-ND3P03897 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.07■□□□□ 0.32
MT-ND3P03897 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.07■□□□□ 0.32
MT-ND3P03897 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
MT-ND3P03897 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.07■□□□□ 0.32
MT-ND3P03897 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MT-ND3P03897 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.07■□□□□ 0.32
MT-ND3P03897 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
MT-ND3P03897 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
MT-ND3P03897 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
MT-ND3P03897 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.07■□□□□ 0.32
MT-ND3P03897 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
MT-ND3P03897 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
MT-ND3P03897 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
MT-ND3P03897 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.07■□□□□ 0.32
MT-ND3P03897 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
MT-ND3P03897 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
MT-ND3P03897 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MT-ND3P03897 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MT-ND3P03897 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.06■□□□□ 0.32
MT-ND3P03897 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
MT-ND3P03897 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MT-ND3P03897 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MT-ND3P03897 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MT-ND3P03897 AC063926.3-201ENST00000624734 5658 ntBASIC17.06■□□□□ 0.32
MT-ND3P03897 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.06■□□□□ 0.32
MT-ND3P03897 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MT-ND3P03897 TP73-AS1-210ENST00000637775 1455 ntBASIC17.06■□□□□ 0.32
MT-ND3P03897 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MT-ND3P03897 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
MT-ND3P03897 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MT-ND3P03897 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
MT-ND3P03897 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MT-ND3P03897 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
MT-ND3P03897 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MT-ND3P03897 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MT-ND3P03897 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MT-ND3P03897 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MT-ND3P03897 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
MT-ND3P03897 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MT-ND3P03897 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.06■□□□□ 0.32
MT-ND3P03897 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.06■□□□□ 0.32
MT-ND3P03897 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MT-ND3P03897 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.06■□□□□ 0.32
MT-ND3P03897 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
MT-ND3P03897 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MT-ND3P03897 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MT-ND3P03897 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MT-ND3P03897 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.06■□□□□ 0.32
MT-ND3P03897 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.06■□□□□ 0.32
MT-ND3P03897 RBM17P3-201ENST00000417687 1192 ntBASIC17.06■□□□□ 0.32
MT-ND3P03897 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
MT-ND3P03897 AC093909.1-201ENST00000504731 1122 ntBASIC17.06■□□□□ 0.32
MT-ND3P03897 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.06■□□□□ 0.32
MT-ND3P03897 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.06■□□□□ 0.32
MT-ND3P03897 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
MT-ND3P03897 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MT-ND3P03897 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
MT-ND3P03897 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
MT-ND3P03897 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MT-ND3P03897 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MT-ND3P03897 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
MT-ND3P03897 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MT-ND3P03897 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.06■□□□□ 0.32
MT-ND3P03897 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MT-ND3P03897 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MT-ND3P03897 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
MT-ND3P03897 PAUPAR-201ENST00000630360 2965 ntBASIC17.06■□□□□ 0.32
MT-ND3P03897 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.06■□□□□ 0.32
MT-ND3P03897 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.06■□□□□ 0.32
MT-ND3P03897 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms