Protein–RNA interactions for Protein: P01850

TRBC1, T-cell receptor beta-1 chain C region, humanhuman

Predictions only

Length 177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBC1P01850 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBC1P01850 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.7■□□□□ 0.26
TRBC1P01850 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBC1P01850 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRBC1P01850 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBC1P01850 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBC1P01850 YBX1P5-201ENST00000509441 847 ntBASIC16.7■□□□□ 0.26
TRBC1P01850 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.7■□□□□ 0.26
TRBC1P01850 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
TRBC1P01850 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.7■□□□□ 0.26
TRBC1P01850 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
TRBC1P01850 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRBC1P01850 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBC1P01850 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBC1P01850 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRBC1P01850 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBC1P01850 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBC1P01850 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRBC1P01850 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBC1P01850 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBC1P01850 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBC1P01850 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBC1P01850 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBC1P01850 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBC1P01850 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBC1P01850 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRBC1P01850 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBC1P01850 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRBC1P01850 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
TRBC1P01850 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBC1P01850 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBC1P01850 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.7■□□□□ 0.26
TRBC1P01850 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.69■□□□□ 0.26
TRBC1P01850 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBC1P01850 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBC1P01850 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBC1P01850 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TRBC1P01850 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
TRBC1P01850 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.69■□□□□ 0.26
TRBC1P01850 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.69■□□□□ 0.26
TRBC1P01850 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBC1P01850 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.69■□□□□ 0.26
TRBC1P01850 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
TRBC1P01850 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.69■□□□□ 0.26
TRBC1P01850 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBC1P01850 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBC1P01850 ELL2P1-201ENST00000413990 1906 ntBASIC16.69■□□□□ 0.26
TRBC1P01850 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRBC1P01850 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
TRBC1P01850 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBC1P01850 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.69■□□□□ 0.26
TRBC1P01850 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRBC1P01850 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.69■□□□□ 0.26
TRBC1P01850 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.69■□□□□ 0.26
TRBC1P01850 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.69■□□□□ 0.26
TRBC1P01850 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRBC1P01850 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.69■□□□□ 0.26
TRBC1P01850 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.69■□□□□ 0.26
TRBC1P01850 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.69■□□□□ 0.26
TRBC1P01850 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.69■□□□□ 0.26
TRBC1P01850 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.69■□□□□ 0.26
TRBC1P01850 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.69■□□□□ 0.26
TRBC1P01850 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRBC1P01850 GGT4P-201ENST00000623672 1708 ntBASIC16.69■□□□□ 0.26
TRBC1P01850 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.69■□□□□ 0.26
TRBC1P01850 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.69■□□□□ 0.26
TRBC1P01850 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.69■□□□□ 0.26
TRBC1P01850 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.69■□□□□ 0.26
TRBC1P01850 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.69■□□□□ 0.26
TRBC1P01850 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBC1P01850 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.69■□□□□ 0.26
TRBC1P01850 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.69■□□□□ 0.26
TRBC1P01850 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRBC1P01850 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBC1P01850 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.68■□□□□ 0.26
TRBC1P01850 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRBC1P01850 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRBC1P01850 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.68■□□□□ 0.26
TRBC1P01850 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
TRBC1P01850 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
TRBC1P01850 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.68■□□□□ 0.26
TRBC1P01850 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBC1P01850 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
TRBC1P01850 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
TRBC1P01850 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRBC1P01850 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBC1P01850 AL355306.1-201ENST00000415580 579 ntBASIC16.68■□□□□ 0.26
TRBC1P01850 ADH5P3-201ENST00000433842 1137 ntBASIC16.68■□□□□ 0.26
TRBC1P01850 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
TRBC1P01850 RARRES2P8-201ENST00000566335 367 ntBASIC16.68■□□□□ 0.26
TRBC1P01850 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.68■□□□□ 0.26
TRBC1P01850 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
TRBC1P01850 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRBC1P01850 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.68■□□□□ 0.26
TRBC1P01850 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRBC1P01850 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRBC1P01850 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBC1P01850 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
TRBC1P01850 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBC1P01850 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms