Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC24.58■■□□□ 1.53
RAPGEF3O95398 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC24.58■■□□□ 1.53
RAPGEF3O95398 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC24.58■■□□□ 1.53
RAPGEF3O95398 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC24.58■■□□□ 1.53
RAPGEF3O95398 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC24.58■■□□□ 1.53
RAPGEF3O95398 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC24.58■■□□□ 1.53
RAPGEF3O95398 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC24.58■■□□□ 1.53
RAPGEF3O95398 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
RAPGEF3O95398 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
RAPGEF3O95398 LINC01115-203ENST00000606068 577 ntBASIC24.58■■□□□ 1.53
RAPGEF3O95398 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
RAPGEF3O95398 MIR6727-201ENST00000620702 65 ntBASIC24.58■■□□□ 1.53
RAPGEF3O95398 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.53
RAPGEF3O95398 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC24.58■■□□□ 1.53
RAPGEF3O95398 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
RAPGEF3O95398 TPR-209ENST00000613151 2478 ntTSL 5 BASIC24.58■■□□□ 1.53
RAPGEF3O95398 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.52
RAPGEF3O95398 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC24.58■■□□□ 1.52
RAPGEF3O95398 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
RAPGEF3O95398 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
RAPGEF3O95398 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RAPGEF3O95398 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RAPGEF3O95398 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RAPGEF3O95398 HNRNPA1P48-201ENST00000562726 1377 ntBASIC24.57■■□□□ 1.52
RAPGEF3O95398 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RAPGEF3O95398 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RAPGEF3O95398 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC24.57■■□□□ 1.52
RAPGEF3O95398 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RAPGEF3O95398 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RAPGEF3O95398 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC24.57■■□□□ 1.52
RAPGEF3O95398 APOA1-205ENST00000375329 927 ntTSL 2 BASIC24.57■■□□□ 1.52
RAPGEF3O95398 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC24.57■■□□□ 1.52
RAPGEF3O95398 YBX1P6-201ENST00000442962 1002 ntBASIC24.57■■□□□ 1.52
RAPGEF3O95398 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC24.57■■□□□ 1.52
RAPGEF3O95398 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC24.57■■□□□ 1.52
RAPGEF3O95398 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
RAPGEF3O95398 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC24.57■■□□□ 1.52
RAPGEF3O95398 AC091271.1-201ENST00000611877 1162 ntBASIC24.57■■□□□ 1.52
RAPGEF3O95398 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC24.57■■□□□ 1.52
RAPGEF3O95398 AL158212.4-201ENST00000624062 1286 ntBASIC24.57■■□□□ 1.52
RAPGEF3O95398 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC24.57■■□□□ 1.52
RAPGEF3O95398 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC24.57■■□□□ 1.52
RAPGEF3O95398 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
RAPGEF3O95398 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
RAPGEF3O95398 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RAPGEF3O95398 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC24.56■■□□□ 1.52
RAPGEF3O95398 AMT-232ENST00000636199 1546 ntTSL 5 BASIC24.56■■□□□ 1.52
RAPGEF3O95398 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
RAPGEF3O95398 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
RAPGEF3O95398 AC016396.2-201ENST00000562575 1417 ntBASIC24.56■■□□□ 1.52
RAPGEF3O95398 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
RAPGEF3O95398 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
RAPGEF3O95398 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
RAPGEF3O95398 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
RAPGEF3O95398 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC24.56■■□□□ 1.52
RAPGEF3O95398 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
RAPGEF3O95398 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC24.56■■□□□ 1.52
RAPGEF3O95398 AC068587.3-201ENST00000526613 355 ntBASIC24.56■■□□□ 1.52
RAPGEF3O95398 AC079328.1-201ENST00000560358 952 ntBASIC24.56■■□□□ 1.52
RAPGEF3O95398 RN7SL560P-201ENST00000577943 264 ntBASIC24.56■■□□□ 1.52
RAPGEF3O95398 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
RAPGEF3O95398 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
RAPGEF3O95398 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
RAPGEF3O95398 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
RAPGEF3O95398 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC24.56■■□□□ 1.52
RAPGEF3O95398 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
RAPGEF3O95398 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
RAPGEF3O95398 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
RAPGEF3O95398 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
RAPGEF3O95398 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
RAPGEF3O95398 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC24.55■■□□□ 1.52
RAPGEF3O95398 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RAPGEF3O95398 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RAPGEF3O95398 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RAPGEF3O95398 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC24.55■■□□□ 1.52
RAPGEF3O95398 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC24.55■■□□□ 1.52
RAPGEF3O95398 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
RAPGEF3O95398 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC24.55■■□□□ 1.52
RAPGEF3O95398 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
RAPGEF3O95398 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC24.55■■□□□ 1.52
RAPGEF3O95398 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC24.55■■□□□ 1.52
RAPGEF3O95398 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
RAPGEF3O95398 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RAPGEF3O95398 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC24.55■■□□□ 1.52
RAPGEF3O95398 FTH1P14-201ENST00000482930 551 ntBASIC24.55■■□□□ 1.52
RAPGEF3O95398 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RAPGEF3O95398 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
RAPGEF3O95398 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC24.55■■□□□ 1.52
RAPGEF3O95398 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RAPGEF3O95398 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RAPGEF3O95398 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC24.55■■□□□ 1.52
RAPGEF3O95398 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RAPGEF3O95398 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RAPGEF3O95398 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
RAPGEF3O95398 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
RAPGEF3O95398 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC24.55■■□□□ 1.52
RAPGEF3O95398 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC24.55■■□□□ 1.52
RAPGEF3O95398 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
RAPGEF3O95398 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC24.55■■□□□ 1.52
RAPGEF3O95398 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC24.54■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms