Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MBD4O95243 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.86■□□□□ 0.77
MBD4O95243 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC19.86■□□□□ 0.77
MBD4O95243 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MBD4O95243 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MBD4O95243 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.86■□□□□ 0.77
MBD4O95243 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
MBD4O95243 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC19.85■□□□□ 0.77
MBD4O95243 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC19.85■□□□□ 0.77
MBD4O95243 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MBD4O95243 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
MBD4O95243 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC19.85■□□□□ 0.77
MBD4O95243 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
MBD4O95243 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.85■□□□□ 0.77
MBD4O95243 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC19.85■□□□□ 0.77
MBD4O95243 AD000864.1-201ENST00000624076 2295 ntBASIC19.85■□□□□ 0.77
MBD4O95243 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MBD4O95243 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
MBD4O95243 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
MBD4O95243 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC19.85■□□□□ 0.77
MBD4O95243 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
MBD4O95243 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC19.85■□□□□ 0.77
MBD4O95243 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC19.85■□□□□ 0.77
MBD4O95243 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC19.85■□□□□ 0.77
MBD4O95243 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC19.85■□□□□ 0.77
MBD4O95243 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC19.85■□□□□ 0.77
MBD4O95243 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC19.85■□□□□ 0.77
MBD4O95243 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
MBD4O95243 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
MBD4O95243 DAD1-205ENST00000543337 501 ntTSL 3 BASIC19.85■□□□□ 0.77
MBD4O95243 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
MBD4O95243 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC19.85■□□□□ 0.77
MBD4O95243 KRT8P23-201ENST00000560090 1207 ntBASIC19.85■□□□□ 0.77
MBD4O95243 AP000842.3-202ENST00000569238 1080 ntBASIC19.85■□□□□ 0.77
MBD4O95243 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
MBD4O95243 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
MBD4O95243 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
MBD4O95243 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
MBD4O95243 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
MBD4O95243 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC19.85■□□□□ 0.77
MBD4O95243 GPAA1P2-202ENST00000606848 1787 ntBASIC19.85■□□□□ 0.77
MBD4O95243 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MBD4O95243 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
MBD4O95243 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC19.85■□□□□ 0.77
MBD4O95243 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
MBD4O95243 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
MBD4O95243 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MBD4O95243 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
MBD4O95243 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
MBD4O95243 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
MBD4O95243 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
MBD4O95243 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC19.84■□□□□ 0.77
MBD4O95243 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC19.84■□□□□ 0.77
MBD4O95243 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
MBD4O95243 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC19.84■□□□□ 0.77
MBD4O95243 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC19.84■□□□□ 0.77
MBD4O95243 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MBD4O95243 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
MBD4O95243 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
MBD4O95243 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
MBD4O95243 PTMS-202ENST00000389462 773 ntTSL 2 BASIC19.84■□□□□ 0.77
MBD4O95243 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
MBD4O95243 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC19.84■□□□□ 0.77
MBD4O95243 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC19.84■□□□□ 0.77
MBD4O95243 GPS2P2-201ENST00000430745 888 ntBASIC19.84■□□□□ 0.77
MBD4O95243 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC19.84■□□□□ 0.77
MBD4O95243 SLC25A39P2-201ENST00000537614 270 ntBASIC19.84■□□□□ 0.77
MBD4O95243 SSH2-211ENST00000590153 570 ntTSL 4 BASIC19.84■□□□□ 0.77
MBD4O95243 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC19.84■□□□□ 0.77
MBD4O95243 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC19.84■□□□□ 0.77
MBD4O95243 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
MBD4O95243 FLJ38576-201ENST00000623820 2459 ntBASIC19.84■□□□□ 0.77
MBD4O95243 AC092171.3-201ENST00000610122 2651 ntBASIC19.84■□□□□ 0.77
MBD4O95243 AC011676.5-201ENST00000624864 2660 ntBASIC19.84■□□□□ 0.77
MBD4O95243 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MBD4O95243 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
MBD4O95243 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MBD4O95243 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC19.84■□□□□ 0.77
MBD4O95243 NF2-208ENST00000403435 2568 ntTSL 5 BASIC19.84■□□□□ 0.77
MBD4O95243 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
MBD4O95243 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
MBD4O95243 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
MBD4O95243 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
MBD4O95243 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
MBD4O95243 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
MBD4O95243 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC19.83■□□□□ 0.77
MBD4O95243 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
MBD4O95243 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
MBD4O95243 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC19.83■□□□□ 0.77
MBD4O95243 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
MBD4O95243 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC19.83■□□□□ 0.77
MBD4O95243 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC19.83■□□□□ 0.77
MBD4O95243 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC19.83■□□□□ 0.77
MBD4O95243 HLA-J-203ENST00000494367 1087 ntBASIC19.83■□□□□ 0.77
MBD4O95243 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC19.83■□□□□ 0.77
MBD4O95243 PRYP6-201ENST00000514804 343 ntBASIC19.83■□□□□ 0.77
MBD4O95243 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
MBD4O95243 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC19.83■□□□□ 0.77
MBD4O95243 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC19.83■□□□□ 0.77
MBD4O95243 LINC00628-201ENST00000628516 1289 ntBASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms