Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 AC002472.2-201ENST00000442739 958 ntBASIC16.57■□□□□ 0.24
PCDHGA12O60330 FAM207CP-201ENST00000443486 507 ntBASIC16.57■□□□□ 0.24
PCDHGA12O60330 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.57■□□□□ 0.24
PCDHGA12O60330 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGA12O60330 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGA12O60330 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.57■□□□□ 0.24
PCDHGA12O60330 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.57■□□□□ 0.24
PCDHGA12O60330 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.57■□□□□ 0.24
PCDHGA12O60330 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGA12O60330 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGA12O60330 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.57■□□□□ 0.24
PCDHGA12O60330 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGA12O60330 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.56■□□□□ 0.24
PCDHGA12O60330 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA12O60330 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.56■□□□□ 0.24
PCDHGA12O60330 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
PCDHGA12O60330 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA12O60330 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA12O60330 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.56■□□□□ 0.24
PCDHGA12O60330 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA12O60330 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA12O60330 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA12O60330 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
PCDHGA12O60330 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.56■□□□□ 0.24
PCDHGA12O60330 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA12O60330 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.56■□□□□ 0.24
PCDHGA12O60330 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.56■□□□□ 0.24
PCDHGA12O60330 AC236430.1-201ENST00000402231 743 ntBASIC16.56■□□□□ 0.24
PCDHGA12O60330 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.56■□□□□ 0.24
PCDHGA12O60330 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.56■□□□□ 0.24
PCDHGA12O60330 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.56■□□□□ 0.24
PCDHGA12O60330 TSPY16P-201ENST00000449843 468 ntBASIC16.56■□□□□ 0.24
PCDHGA12O60330 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC16.56■□□□□ 0.24
PCDHGA12O60330 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.56■□□□□ 0.24
PCDHGA12O60330 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
PCDHGA12O60330 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
PCDHGA12O60330 RBM7-207ENST00000544582 692 ntTSL 3 BASIC16.56■□□□□ 0.24
PCDHGA12O60330 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA12O60330 AC026150.2-201ENST00000564693 1156 ntBASIC16.56■□□□□ 0.24
PCDHGA12O60330 RN7SL204P-201ENST00000582831 262 ntBASIC16.56■□□□□ 0.24
PCDHGA12O60330 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.56■□□□□ 0.24
PCDHGA12O60330 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.56■□□□□ 0.24
PCDHGA12O60330 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA12O60330 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
PCDHGA12O60330 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
PCDHGA12O60330 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA12O60330 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
PCDHGA12O60330 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA12O60330 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.56■□□□□ 0.24
PCDHGA12O60330 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.56■□□□□ 0.24
PCDHGA12O60330 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.56■□□□□ 0.24
PCDHGA12O60330 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA12O60330 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.56■□□□□ 0.24
PCDHGA12O60330 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
PCDHGA12O60330 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA12O60330 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.56■□□□□ 0.24
PCDHGA12O60330 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.56■□□□□ 0.24
PCDHGA12O60330 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
PCDHGA12O60330 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA12O60330 AC012569.1-201ENST00000591191 1524 ntBASIC16.55■□□□□ 0.24
PCDHGA12O60330 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
PCDHGA12O60330 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA12O60330 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDHGA12O60330 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
PCDHGA12O60330 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA12O60330 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA12O60330 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.55■□□□□ 0.24
PCDHGA12O60330 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA12O60330 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PCDHGA12O60330 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA12O60330 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA12O60330 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA12O60330 AC005034.1-201ENST00000426657 489 ntBASIC16.55■□□□□ 0.24
PCDHGA12O60330 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.55■□□□□ 0.24
PCDHGA12O60330 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA12O60330 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA12O60330 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.55■□□□□ 0.24
PCDHGA12O60330 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.55■□□□□ 0.24
PCDHGA12O60330 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA12O60330 AL035252.4-201ENST00000624174 288 ntBASIC16.55■□□□□ 0.24
PCDHGA12O60330 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA12O60330 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PCDHGA12O60330 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.55■□□□□ 0.24
PCDHGA12O60330 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDHGA12O60330 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDHGA12O60330 AC018695.7-201ENST00000624587 2492 ntBASIC16.55■□□□□ 0.24
PCDHGA12O60330 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA12O60330 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.55■□□□□ 0.24
PCDHGA12O60330 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA12O60330 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
PCDHGA12O60330 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PCDHGA12O60330 LINC00304-203ENST00000565008 1864 ntBASIC16.54■□□□□ 0.24
PCDHGA12O60330 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA12O60330 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA12O60330 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDHGA12O60330 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA12O60330 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA12O60330 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PCDHGA12O60330 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA12O60330 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms