Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.26■□□□□ 0.03
RNF13O43567 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.26■□□□□ 0.03
RNF13O43567 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF13O43567 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
RNF13O43567 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF13O43567 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
RNF13O43567 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
RNF13O43567 AC132872.4-202ENST00000622924 2756 ntBASIC15.25■□□□□ 0.03
RNF13O43567 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
RNF13O43567 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF13O43567 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
RNF13O43567 AC092364.2-201ENST00000596710 2692 ntBASIC15.25■□□□□ 0.03
RNF13O43567 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF13O43567 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
RNF13O43567 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
RNF13O43567 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF13O43567 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF13O43567 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.25■□□□□ 0.03
RNF13O43567 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
RNF13O43567 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF13O43567 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF13O43567 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.25■□□□□ 0.03
RNF13O43567 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.25■□□□□ 0.03
RNF13O43567 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.25■□□□□ 0.03
RNF13O43567 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC15.25■□□□□ 0.03
RNF13O43567 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RNF13O43567 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF13O43567 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.25■□□□□ 0.03
RNF13O43567 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.25■□□□□ 0.03
RNF13O43567 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.25■□□□□ 0.03
RNF13O43567 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF13O43567 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RNF13O43567 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.25■□□□□ 0.03
RNF13O43567 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.25■□□□□ 0.03
RNF13O43567 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
RNF13O43567 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.25■□□□□ 0.03
RNF13O43567 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RNF13O43567 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF13O43567 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF13O43567 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RNF13O43567 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.24■□□□□ 0.03
RNF13O43567 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RNF13O43567 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF13O43567 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF13O43567 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF13O43567 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
RNF13O43567 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF13O43567 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
RNF13O43567 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF13O43567 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF13O43567 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF13O43567 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF13O43567 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.24■□□□□ 0.03
RNF13O43567 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF13O43567 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
RNF13O43567 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF13O43567 AL645728.1-201ENST00000366221 2101 ntBASIC15.24■□□□□ 0.03
RNF13O43567 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RNF13O43567 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.24■□□□□ 0.03
RNF13O43567 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
RNF13O43567 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.24■□□□□ 0.03
RNF13O43567 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RNF13O43567 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.24■□□□□ 0.03
RNF13O43567 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.24■□□□□ 0.03
RNF13O43567 AC021087.4-201ENST00000563761 564 ntBASIC15.24■□□□□ 0.03
RNF13O43567 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.24■□□□□ 0.03
RNF13O43567 AC004706.3-202ENST00000621574 984 ntBASIC15.24■□□□□ 0.03
RNF13O43567 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.24■□□□□ 0.03
RNF13O43567 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF13O43567 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF13O43567 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF13O43567 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RNF13O43567 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.24■□□□□ 0.03
RNF13O43567 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF13O43567 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RNF13O43567 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RNF13O43567 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF13O43567 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF13O43567 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RNF13O43567 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
RNF13O43567 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RNF13O43567 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RNF13O43567 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.24■□□□□ 0.03
RNF13O43567 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF13O43567 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF13O43567 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
RNF13O43567 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF13O43567 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.23■□□□□ 0.03
RNF13O43567 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF13O43567 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.23■□□□□ 0.03
RNF13O43567 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF13O43567 HLA-A-202ENST00000376806 1854 ntBASIC15.23■□□□□ 0.03
RNF13O43567 AL391256.1-201ENST00000443260 1855 ntBASIC15.23■□□□□ 0.03
RNF13O43567 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.23■□□□□ 0.03
RNF13O43567 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.23■□□□□ 0.03
RNF13O43567 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
RNF13O43567 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC15.23■□□□□ 0.03
RNF13O43567 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF13O43567 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RNF13O43567 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms