Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC19.87■□□□□ 0.77
FOXN1O15353 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC19.87■□□□□ 0.77
FOXN1O15353 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC19.87■□□□□ 0.77
FOXN1O15353 STOM-203ENST00000538954 1257 ntTSL 5 BASIC19.87■□□□□ 0.77
FOXN1O15353 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC19.87■□□□□ 0.77
FOXN1O15353 MPI-209ENST00000564003 1195 ntTSL 2 BASIC19.87■□□□□ 0.77
FOXN1O15353 RN7SL219P-201ENST00000582872 296 ntBASIC19.87■□□□□ 0.77
FOXN1O15353 MIR6727-201ENST00000620702 65 ntBASIC19.87■□□□□ 0.77
FOXN1O15353 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC19.87■□□□□ 0.77
FOXN1O15353 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
FOXN1O15353 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
FOXN1O15353 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
FOXN1O15353 AD000864.1-201ENST00000624076 2295 ntBASIC19.87■□□□□ 0.77
FOXN1O15353 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
FOXN1O15353 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
FOXN1O15353 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
FOXN1O15353 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
FOXN1O15353 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
FOXN1O15353 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
FOXN1O15353 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
FOXN1O15353 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC19.86■□□□□ 0.77
FOXN1O15353 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
FOXN1O15353 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
FOXN1O15353 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
FOXN1O15353 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC19.86■□□□□ 0.77
FOXN1O15353 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
FOXN1O15353 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
FOXN1O15353 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
FOXN1O15353 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
FOXN1O15353 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.86■□□□□ 0.77
FOXN1O15353 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
FOXN1O15353 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
FOXN1O15353 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
FOXN1O15353 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC19.86■□□□□ 0.77
FOXN1O15353 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
FOXN1O15353 BNIP3P42-201ENST00000454982 569 ntBASIC19.86■□□□□ 0.77
FOXN1O15353 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
FOXN1O15353 STK19B-204ENST00000512515 211 ntBASIC19.86■□□□□ 0.77
FOXN1O15353 LY6E-204ENST00000519546 971 ntTSL 2 BASIC19.86■□□□□ 0.77
FOXN1O15353 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC19.86■□□□□ 0.77
FOXN1O15353 SNX29P1-201ENST00000548357 1007 ntBASIC19.86■□□□□ 0.77
FOXN1O15353 BNIP3P29-201ENST00000598302 571 ntBASIC19.86■□□□□ 0.77
FOXN1O15353 AC008738.7-201ENST00000609744 511 ntBASIC19.86■□□□□ 0.77
FOXN1O15353 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
FOXN1O15353 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
FOXN1O15353 AL138828.2-201ENST00000615812 383 ntBASIC19.86■□□□□ 0.77
FOXN1O15353 AC011447.5-201ENST00000616168 564 ntBASIC19.86■□□□□ 0.77
FOXN1O15353 MIR6775-201ENST00000617557 69 ntBASIC19.86■□□□□ 0.77
FOXN1O15353 AL645728.2-201ENST00000641974 660 ntBASIC19.86■□□□□ 0.77
FOXN1O15353 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
FOXN1O15353 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
FOXN1O15353 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
FOXN1O15353 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.86■□□□□ 0.77
FOXN1O15353 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
FOXN1O15353 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
FOXN1O15353 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
FOXN1O15353 LYSMD4-203ENST00000378904 2122 ntBASIC19.85■□□□□ 0.77
FOXN1O15353 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
FOXN1O15353 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
FOXN1O15353 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
FOXN1O15353 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
FOXN1O15353 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC19.85■□□□□ 0.77
FOXN1O15353 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC19.85■□□□□ 0.77
FOXN1O15353 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC19.85■□□□□ 0.77
FOXN1O15353 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC19.85■□□□□ 0.77
FOXN1O15353 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
FOXN1O15353 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
FOXN1O15353 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
FOXN1O15353 AC009477.1-201ENST00000452936 217 ntBASIC19.85■□□□□ 0.77
FOXN1O15353 THTPA-204ENST00000554970 569 ntTSL 4 BASIC19.85■□□□□ 0.77
FOXN1O15353 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC19.85■□□□□ 0.77
FOXN1O15353 THTPA-206ENST00000556015 535 ntTSL 3 BASIC19.85■□□□□ 0.77
FOXN1O15353 AL161645.1-201ENST00000622716 1255 ntBASIC19.85■□□□□ 0.77
FOXN1O15353 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC19.85■□□□□ 0.77
FOXN1O15353 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
FOXN1O15353 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
FOXN1O15353 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
FOXN1O15353 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.85■□□□□ 0.77
FOXN1O15353 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
FOXN1O15353 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
FOXN1O15353 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC19.84■□□□□ 0.77
FOXN1O15353 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
FOXN1O15353 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC19.84■□□□□ 0.77
FOXN1O15353 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
FOXN1O15353 STX3-203ENST00000529177 1571 ntTSL 2 BASIC19.84■□□□□ 0.77
FOXN1O15353 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
FOXN1O15353 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
FOXN1O15353 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
FOXN1O15353 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
FOXN1O15353 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
FOXN1O15353 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
FOXN1O15353 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
FOXN1O15353 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC19.84■□□□□ 0.77
FOXN1O15353 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC19.84■□□□□ 0.77
FOXN1O15353 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC19.84■□□□□ 0.77
FOXN1O15353 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC19.84■□□□□ 0.77
FOXN1O15353 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC19.84■□□□□ 0.77
FOXN1O15353 WASH4P-201ENST00000564273 1246 ntBASIC19.84■□□□□ 0.77
FOXN1O15353 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC19.84■□□□□ 0.77
FOXN1O15353 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms