Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC22.74■■□□□ 1.23
CHD2O14647 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
CHD2O14647 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CHD2O14647 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CHD2O14647 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC22.74■■□□□ 1.23
CHD2O14647 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
CHD2O14647 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CHD2O14647 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC22.74■■□□□ 1.23
CHD2O14647 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC22.74■■□□□ 1.23
CHD2O14647 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CHD2O14647 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC22.74■■□□□ 1.23
CHD2O14647 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC22.74■■□□□ 1.23
CHD2O14647 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC22.74■■□□□ 1.23
CHD2O14647 MIR3615-201ENST00000581999 87 ntBASIC22.74■■□□□ 1.23
CHD2O14647 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC22.74■■□□□ 1.23
CHD2O14647 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CHD2O14647 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
CHD2O14647 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
CHD2O14647 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CHD2O14647 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC22.74■■□□□ 1.23
CHD2O14647 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CHD2O14647 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC22.74■■□□□ 1.23
CHD2O14647 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC22.73■■□□□ 1.23
CHD2O14647 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CHD2O14647 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
CHD2O14647 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
CHD2O14647 FO393414.2-201ENST00000405153 598 ntBASIC22.73■■□□□ 1.23
CHD2O14647 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC22.73■■□□□ 1.23
CHD2O14647 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
CHD2O14647 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC22.73■■□□□ 1.23
CHD2O14647 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC22.73■■□□□ 1.23
CHD2O14647 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC22.73■■□□□ 1.23
CHD2O14647 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
CHD2O14647 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC22.73■■□□□ 1.23
CHD2O14647 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
CHD2O14647 AL031731.1-201ENST00000642131 2094 ntBASIC22.73■■□□□ 1.23
CHD2O14647 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
CHD2O14647 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC22.73■■□□□ 1.23
CHD2O14647 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC22.73■■□□□ 1.23
CHD2O14647 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CHD2O14647 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC22.73■■□□□ 1.23
CHD2O14647 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
CHD2O14647 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
CHD2O14647 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC22.73■■□□□ 1.23
CHD2O14647 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC22.73■■□□□ 1.23
CHD2O14647 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC22.73■■□□□ 1.23
CHD2O14647 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC22.73■■□□□ 1.23
CHD2O14647 PFN1P12-201ENST00000455938 534 ntBASIC22.73■■□□□ 1.23
CHD2O14647 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC22.73■■□□□ 1.23
CHD2O14647 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC22.73■■□□□ 1.23
CHD2O14647 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC22.73■■□□□ 1.23
CHD2O14647 AC133539.2-201ENST00000604757 467 ntBASIC22.73■■□□□ 1.23
CHD2O14647 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC22.73■■□□□ 1.23
CHD2O14647 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
CHD2O14647 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
CHD2O14647 INTS4P2-202ENST00000614726 2019 ntBASIC22.72■■□□□ 1.23
CHD2O14647 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CHD2O14647 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CHD2O14647 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC22.72■■□□□ 1.23
CHD2O14647 TPO-206ENST00000382269 1155 ntTSL 5 BASIC22.72■■□□□ 1.23
CHD2O14647 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CHD2O14647 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC22.72■■□□□ 1.23
CHD2O14647 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC22.72■■□□□ 1.23
CHD2O14647 HNRNPA1P13-201ENST00000510646 963 ntBASIC22.72■■□□□ 1.23
CHD2O14647 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC22.72■■□□□ 1.23
CHD2O14647 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC22.72■■□□□ 1.23
CHD2O14647 MIR4321-201ENST00000592276 80 ntBASIC22.72■■□□□ 1.23
CHD2O14647 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC22.72■■□□□ 1.23
CHD2O14647 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC22.72■■□□□ 1.23
CHD2O14647 PPA1-206ENST00000625364 644 ntTSL 5 BASIC22.72■■□□□ 1.23
CHD2O14647 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
CHD2O14647 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CHD2O14647 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CHD2O14647 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
CHD2O14647 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
CHD2O14647 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
CHD2O14647 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CHD2O14647 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CHD2O14647 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC22.71■■□□□ 1.23
CHD2O14647 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CHD2O14647 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CHD2O14647 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC22.71■■□□□ 1.23
CHD2O14647 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CHD2O14647 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CHD2O14647 AC092506.1-202ENST00000401022 528 ntBASIC22.71■■□□□ 1.23
CHD2O14647 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC22.71■■□□□ 1.23
CHD2O14647 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC22.71■■□□□ 1.23
CHD2O14647 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC22.71■■□□□ 1.23
CHD2O14647 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CHD2O14647 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CHD2O14647 PTP4A1P2-201ENST00000546033 454 ntBASIC22.71■■□□□ 1.23
CHD2O14647 KRT90P-201ENST00000549264 1064 ntBASIC22.71■■□□□ 1.23
CHD2O14647 RN7SL560P-201ENST00000577943 264 ntBASIC22.71■■□□□ 1.23
CHD2O14647 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC22.71■■□□□ 1.23
CHD2O14647 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
CHD2O14647 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
CHD2O14647 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
CHD2O14647 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CHD2O14647 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
CHD2O14647 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms