Protein–RNA interactions for Protein: Q9Y6Q6

TNFRSF11A, Tumor necrosis factor receptor superfamily member 11A, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11AQ9Y6Q6 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
TNFRSF11AQ9Y6Q6 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC29.54■■■□□ 2.32
TNFRSF11AQ9Y6Q6 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
TNFRSF11AQ9Y6Q6 RARRES2P1-201ENST00000474487 481 ntBASIC29.53■■■□□ 2.32
TNFRSF11AQ9Y6Q6 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC29.53■■■□□ 2.32
TNFRSF11AQ9Y6Q6 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC29.53■■■□□ 2.32
TNFRSF11AQ9Y6Q6 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
TNFRSF11AQ9Y6Q6 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC29.53■■■□□ 2.32
TNFRSF11AQ9Y6Q6 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC29.53■■■□□ 2.32
TNFRSF11AQ9Y6Q6 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC29.52■■■□□ 2.32
TNFRSF11AQ9Y6Q6 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC29.52■■■□□ 2.32
TNFRSF11AQ9Y6Q6 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC29.52■■■□□ 2.32
TNFRSF11AQ9Y6Q6 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC29.52■■■□□ 2.32
TNFRSF11AQ9Y6Q6 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC29.52■■■□□ 2.32
TNFRSF11AQ9Y6Q6 AC010501.1-201ENST00000606270 1962 ntBASIC29.52■■■□□ 2.32
TNFRSF11AQ9Y6Q6 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC29.51■■■□□ 2.32
TNFRSF11AQ9Y6Q6 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
TNFRSF11AQ9Y6Q6 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
TNFRSF11AQ9Y6Q6 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
TNFRSF11AQ9Y6Q6 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
TNFRSF11AQ9Y6Q6 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC29.49■■■□□ 2.31
TNFRSF11AQ9Y6Q6 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC29.49■■■□□ 2.31
TNFRSF11AQ9Y6Q6 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC29.49■■■□□ 2.31
TNFRSF11AQ9Y6Q6 BHLHE23-202ENST00000612929 1109 ntBASIC29.49■■■□□ 2.31
TNFRSF11AQ9Y6Q6 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
TNFRSF11AQ9Y6Q6 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
TNFRSF11AQ9Y6Q6 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
TNFRSF11AQ9Y6Q6 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC29.48■■■□□ 2.31
TNFRSF11AQ9Y6Q6 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
TNFRSF11AQ9Y6Q6 LONRF2P2-201ENST00000439212 571 ntBASIC29.48■■■□□ 2.31
TNFRSF11AQ9Y6Q6 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC29.48■■■□□ 2.31
TNFRSF11AQ9Y6Q6 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC29.47■■■□□ 2.31
TNFRSF11AQ9Y6Q6 IDNK-201ENST00000376417 511 ntTSL 5 BASIC29.47■■■□□ 2.31
TNFRSF11AQ9Y6Q6 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
TNFRSF11AQ9Y6Q6 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC29.47■■■□□ 2.31
TNFRSF11AQ9Y6Q6 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
TNFRSF11AQ9Y6Q6 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC29.46■■■□□ 2.31
TNFRSF11AQ9Y6Q6 AC139795.1-202ENST00000500444 432 ntBASIC29.46■■■□□ 2.31
TNFRSF11AQ9Y6Q6 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC29.46■■■□□ 2.31
TNFRSF11AQ9Y6Q6 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC29.46■■■□□ 2.31
TNFRSF11AQ9Y6Q6 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
TNFRSF11AQ9Y6Q6 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
TNFRSF11AQ9Y6Q6 KRT8P33-201ENST00000508125 1423 ntBASIC29.45■■■□□ 2.31
TNFRSF11AQ9Y6Q6 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
TNFRSF11AQ9Y6Q6 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC29.45■■■□□ 2.31
TNFRSF11AQ9Y6Q6 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC29.45■■■□□ 2.3
TNFRSF11AQ9Y6Q6 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
TNFRSF11AQ9Y6Q6 SNAI3-AS1-204ENST00000567997 2048 ntBASIC29.44■■■□□ 2.3
TNFRSF11AQ9Y6Q6 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC29.44■■■□□ 2.3
TNFRSF11AQ9Y6Q6 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC29.44■■■□□ 2.3
TNFRSF11AQ9Y6Q6 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC29.43■■■□□ 2.3
TNFRSF11AQ9Y6Q6 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
TNFRSF11AQ9Y6Q6 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC29.43■■■□□ 2.3
TNFRSF11AQ9Y6Q6 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
TNFRSF11AQ9Y6Q6 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC29.43■■■□□ 2.3
TNFRSF11AQ9Y6Q6 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC29.43■■■□□ 2.3
TNFRSF11AQ9Y6Q6 DUSP8P4-201ENST00000399538 1761 ntBASIC29.43■■■□□ 2.3
TNFRSF11AQ9Y6Q6 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
TNFRSF11AQ9Y6Q6 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC29.43■■■□□ 2.3
TNFRSF11AQ9Y6Q6 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
TNFRSF11AQ9Y6Q6 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
TNFRSF11AQ9Y6Q6 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC29.42■■■□□ 2.3
TNFRSF11AQ9Y6Q6 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
TNFRSF11AQ9Y6Q6 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
TNFRSF11AQ9Y6Q6 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
TNFRSF11AQ9Y6Q6 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC29.41■■■□□ 2.3
TNFRSF11AQ9Y6Q6 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC29.41■■■□□ 2.3
TNFRSF11AQ9Y6Q6 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC29.41■■■□□ 2.3
TNFRSF11AQ9Y6Q6 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC29.41■■■□□ 2.3
TNFRSF11AQ9Y6Q6 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
TNFRSF11AQ9Y6Q6 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
TNFRSF11AQ9Y6Q6 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC29.4■■■□□ 2.3
TNFRSF11AQ9Y6Q6 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC29.39■■■□□ 2.3
TNFRSF11AQ9Y6Q6 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC29.39■■■□□ 2.3
TNFRSF11AQ9Y6Q6 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC29.39■■■□□ 2.3
TNFRSF11AQ9Y6Q6 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC29.39■■■□□ 2.3
TNFRSF11AQ9Y6Q6 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC29.39■■■□□ 2.29
TNFRSF11AQ9Y6Q6 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
TNFRSF11AQ9Y6Q6 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC29.38■■■□□ 2.29
TNFRSF11AQ9Y6Q6 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC29.37■■■□□ 2.29
TNFRSF11AQ9Y6Q6 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC29.37■■■□□ 2.29
TNFRSF11AQ9Y6Q6 AC074183.2-201ENST00000623112 922 ntBASIC29.37■■■□□ 2.29
TNFRSF11AQ9Y6Q6 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
TNFRSF11AQ9Y6Q6 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
TNFRSF11AQ9Y6Q6 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
TNFRSF11AQ9Y6Q6 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
TNFRSF11AQ9Y6Q6 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC29.36■■■□□ 2.29
TNFRSF11AQ9Y6Q6 HYI-210ENST00000486909 905 ntTSL 5 BASIC29.36■■■□□ 2.29
TNFRSF11AQ9Y6Q6 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
TNFRSF11AQ9Y6Q6 AC145676.1-201ENST00000514988 2004 ntBASIC29.36■■■□□ 2.29
TNFRSF11AQ9Y6Q6 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC29.36■■■□□ 2.29
TNFRSF11AQ9Y6Q6 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
TNFRSF11AQ9Y6Q6 AC019171.1-201ENST00000601251 1056 ntBASIC29.35■■■□□ 2.29
TNFRSF11AQ9Y6Q6 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
TNFRSF11AQ9Y6Q6 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC29.34■■■□□ 2.29
TNFRSF11AQ9Y6Q6 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC29.34■■■□□ 2.29
TNFRSF11AQ9Y6Q6 MTX2-204ENST00000443241 799 ntTSL 3 BASIC29.34■■■□□ 2.29
TNFRSF11AQ9Y6Q6 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
TNFRSF11AQ9Y6Q6 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
TNFRSF11AQ9Y6Q6 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms