Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC19.01■□□□□ 0.63
LSM4Q9Y4Z0 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.01■□□□□ 0.63
LSM4Q9Y4Z0 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LSM4Q9Y4Z0 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LSM4Q9Y4Z0 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LSM4Q9Y4Z0 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LSM4Q9Y4Z0 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LSM4Q9Y4Z0 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
LSM4Q9Y4Z0 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
LSM4Q9Y4Z0 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LSM4Q9Y4Z0 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
LSM4Q9Y4Z0 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LSM4Q9Y4Z0 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
LSM4Q9Y4Z0 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC19■□□□□ 0.63
LSM4Q9Y4Z0 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19■□□□□ 0.63
LSM4Q9Y4Z0 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC19■□□□□ 0.63
LSM4Q9Y4Z0 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC19■□□□□ 0.63
LSM4Q9Y4Z0 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LSM4Q9Y4Z0 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LSM4Q9Y4Z0 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
LSM4Q9Y4Z0 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19■□□□□ 0.63
LSM4Q9Y4Z0 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LSM4Q9Y4Z0 AC060814.1-201ENST00000554326 538 ntBASIC18.99■□□□□ 0.63
LSM4Q9Y4Z0 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC18.99■□□□□ 0.63
LSM4Q9Y4Z0 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LSM4Q9Y4Z0 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC18.99■□□□□ 0.63
LSM4Q9Y4Z0 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
LSM4Q9Y4Z0 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
LSM4Q9Y4Z0 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC18.98■□□□□ 0.63
LSM4Q9Y4Z0 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
LSM4Q9Y4Z0 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LSM4Q9Y4Z0 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LSM4Q9Y4Z0 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LSM4Q9Y4Z0 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC18.98■□□□□ 0.63
LSM4Q9Y4Z0 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC18.98■□□□□ 0.63
LSM4Q9Y4Z0 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LSM4Q9Y4Z0 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC18.98■□□□□ 0.63
LSM4Q9Y4Z0 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC18.97■□□□□ 0.63
LSM4Q9Y4Z0 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LSM4Q9Y4Z0 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LSM4Q9Y4Z0 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC18.97■□□□□ 0.63
LSM4Q9Y4Z0 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
LSM4Q9Y4Z0 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LSM4Q9Y4Z0 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LSM4Q9Y4Z0 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LSM4Q9Y4Z0 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LSM4Q9Y4Z0 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LSM4Q9Y4Z0 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LSM4Q9Y4Z0 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
LSM4Q9Y4Z0 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LSM4Q9Y4Z0 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LSM4Q9Y4Z0 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LSM4Q9Y4Z0 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
LSM4Q9Y4Z0 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LSM4Q9Y4Z0 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC18.96■□□□□ 0.63
LSM4Q9Y4Z0 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LSM4Q9Y4Z0 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LSM4Q9Y4Z0 U85056.1-201ENST00000616429 682 ntBASIC18.96■□□□□ 0.63
LSM4Q9Y4Z0 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LSM4Q9Y4Z0 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LSM4Q9Y4Z0 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LSM4Q9Y4Z0 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC18.95■□□□□ 0.62
LSM4Q9Y4Z0 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LSM4Q9Y4Z0 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
LSM4Q9Y4Z0 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
LSM4Q9Y4Z0 AL033527.3-201ENST00000566366 1196 ntBASIC18.95■□□□□ 0.62
LSM4Q9Y4Z0 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
LSM4Q9Y4Z0 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LSM4Q9Y4Z0 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC18.95■□□□□ 0.62
LSM4Q9Y4Z0 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
LSM4Q9Y4Z0 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC18.95■□□□□ 0.62
LSM4Q9Y4Z0 HYI-213ENST00000583037 1322 ntTSL 5 BASIC18.95■□□□□ 0.62
LSM4Q9Y4Z0 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC18.95■□□□□ 0.62
LSM4Q9Y4Z0 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LSM4Q9Y4Z0 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LSM4Q9Y4Z0 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LSM4Q9Y4Z0 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LSM4Q9Y4Z0 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LSM4Q9Y4Z0 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
LSM4Q9Y4Z0 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LSM4Q9Y4Z0 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LSM4Q9Y4Z0 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LSM4Q9Y4Z0 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC18.93■□□□□ 0.62
LSM4Q9Y4Z0 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
LSM4Q9Y4Z0 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LSM4Q9Y4Z0 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
LSM4Q9Y4Z0 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
LSM4Q9Y4Z0 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LSM4Q9Y4Z0 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
LSM4Q9Y4Z0 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
LSM4Q9Y4Z0 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC18.92■□□□□ 0.62
LSM4Q9Y4Z0 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LSM4Q9Y4Z0 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LSM4Q9Y4Z0 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LSM4Q9Y4Z0 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LSM4Q9Y4Z0 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
LSM4Q9Y4Z0 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC18.92■□□□□ 0.62
LSM4Q9Y4Z0 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LSM4Q9Y4Z0 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LSM4Q9Y4Z0 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms