Protein–RNA interactions for Protein: Q96D70

R3HDM4, R3H domain-containing protein 4, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4Q96D70 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
R3HDM4Q96D70 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
R3HDM4Q96D70 AC142381.3-201ENST00000568208 1670 ntBASIC19.59■□□□□ 0.73
R3HDM4Q96D70 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.58■□□□□ 0.73
R3HDM4Q96D70 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.73
R3HDM4Q96D70 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC19.58■□□□□ 0.73
R3HDM4Q96D70 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
R3HDM4Q96D70 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC19.58■□□□□ 0.72
R3HDM4Q96D70 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
R3HDM4Q96D70 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
R3HDM4Q96D70 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
R3HDM4Q96D70 AL359504.2-201ENST00000605506 1601 ntBASIC19.58■□□□□ 0.72
R3HDM4Q96D70 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
R3HDM4Q96D70 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC19.57■□□□□ 0.72
R3HDM4Q96D70 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
R3HDM4Q96D70 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
R3HDM4Q96D70 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
R3HDM4Q96D70 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
R3HDM4Q96D70 AC126177.7-201ENST00000547904 679 ntBASIC19.57■□□□□ 0.72
R3HDM4Q96D70 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
R3HDM4Q96D70 AC093323.1-202ENST00000635031 2045 ntBASIC19.57■□□□□ 0.72
R3HDM4Q96D70 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
R3HDM4Q96D70 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.57■□□□□ 0.72
R3HDM4Q96D70 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
R3HDM4Q96D70 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
R3HDM4Q96D70 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
R3HDM4Q96D70 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
R3HDM4Q96D70 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
R3HDM4Q96D70 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
R3HDM4Q96D70 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC19.56■□□□□ 0.72
R3HDM4Q96D70 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
R3HDM4Q96D70 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
R3HDM4Q96D70 AC096887.2-201ENST00000623443 1957 ntBASIC19.56■□□□□ 0.72
R3HDM4Q96D70 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
R3HDM4Q96D70 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
R3HDM4Q96D70 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
R3HDM4Q96D70 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
R3HDM4Q96D70 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
R3HDM4Q96D70 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
R3HDM4Q96D70 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
R3HDM4Q96D70 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
R3HDM4Q96D70 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
R3HDM4Q96D70 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
R3HDM4Q96D70 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
R3HDM4Q96D70 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
R3HDM4Q96D70 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC19.54■□□□□ 0.72
R3HDM4Q96D70 U85056.1-201ENST00000616429 682 ntBASIC19.54■□□□□ 0.72
R3HDM4Q96D70 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
R3HDM4Q96D70 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC19.54■□□□□ 0.72
R3HDM4Q96D70 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
R3HDM4Q96D70 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC19.53■□□□□ 0.72
R3HDM4Q96D70 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
R3HDM4Q96D70 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC19.53■□□□□ 0.72
R3HDM4Q96D70 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
R3HDM4Q96D70 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.53■□□□□ 0.72
R3HDM4Q96D70 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.53■□□□□ 0.72
R3HDM4Q96D70 AL033527.3-201ENST00000566366 1196 ntBASIC19.53■□□□□ 0.72
R3HDM4Q96D70 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC19.53■□□□□ 0.72
R3HDM4Q96D70 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.53■□□□□ 0.72
R3HDM4Q96D70 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
R3HDM4Q96D70 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.52■□□□□ 0.72
R3HDM4Q96D70 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
R3HDM4Q96D70 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
R3HDM4Q96D70 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
R3HDM4Q96D70 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
R3HDM4Q96D70 AC022211.4-201ENST00000625094 2161 ntBASIC19.52■□□□□ 0.72
R3HDM4Q96D70 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
R3HDM4Q96D70 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
R3HDM4Q96D70 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
R3HDM4Q96D70 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
R3HDM4Q96D70 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
R3HDM4Q96D70 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.51■□□□□ 0.71
R3HDM4Q96D70 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
R3HDM4Q96D70 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
R3HDM4Q96D70 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
R3HDM4Q96D70 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
R3HDM4Q96D70 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
R3HDM4Q96D70 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
R3HDM4Q96D70 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
R3HDM4Q96D70 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC19.5■□□□□ 0.71
R3HDM4Q96D70 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
R3HDM4Q96D70 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
R3HDM4Q96D70 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
R3HDM4Q96D70 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
R3HDM4Q96D70 ECEL1P2-201ENST00000461596 1295 ntBASIC19.49■□□□□ 0.71
R3HDM4Q96D70 AC092296.2-201ENST00000589470 999 ntBASIC19.49■□□□□ 0.71
R3HDM4Q96D70 MED25-210ENST00000612854 801 ntTSL 5 BASIC19.49■□□□□ 0.71
R3HDM4Q96D70 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
R3HDM4Q96D70 MED25-214ENST00000622402 642 ntTSL 5 BASIC19.49■□□□□ 0.71
R3HDM4Q96D70 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
R3HDM4Q96D70 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
R3HDM4Q96D70 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
R3HDM4Q96D70 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.49■□□□□ 0.71
R3HDM4Q96D70 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
R3HDM4Q96D70 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
R3HDM4Q96D70 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
R3HDM4Q96D70 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
R3HDM4Q96D70 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
R3HDM4Q96D70 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC19.48■□□□□ 0.71
R3HDM4Q96D70 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms