Protein–RNA interactions for Protein: Q96BA8

CREB3L1, Cyclic AMP-responsive element-binding protein 3-like protein 1, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CREB3L1Q96BA8 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CREB3L1Q96BA8 DUX4L11-201ENST00000611504 1267 ntBASIC20.72■□□□□ 0.91
CREB3L1Q96BA8 DUX4L12-201ENST00000614593 1267 ntBASIC20.72■□□□□ 0.91
CREB3L1Q96BA8 DUX4L14-201ENST00000621227 1267 ntBASIC20.72■□□□□ 0.91
CREB3L1Q96BA8 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CREB3L1Q96BA8 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CREB3L1Q96BA8 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.72■□□□□ 0.91
CREB3L1Q96BA8 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CREB3L1Q96BA8 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CREB3L1Q96BA8 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CREB3L1Q96BA8 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CREB3L1Q96BA8 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.71■□□□□ 0.91
CREB3L1Q96BA8 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.71■□□□□ 0.91
CREB3L1Q96BA8 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.71■□□□□ 0.91
CREB3L1Q96BA8 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.71■□□□□ 0.91
CREB3L1Q96BA8 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CREB3L1Q96BA8 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CREB3L1Q96BA8 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CREB3L1Q96BA8 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.7■□□□□ 0.91
CREB3L1Q96BA8 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
CREB3L1Q96BA8 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CREB3L1Q96BA8 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CREB3L1Q96BA8 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CREB3L1Q96BA8 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CREB3L1Q96BA8 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC20.7■□□□□ 0.9
CREB3L1Q96BA8 DUX4L13-201ENST00000554103 1267 ntBASIC20.7■□□□□ 0.9
CREB3L1Q96BA8 DUX4L15-201ENST00000611059 1267 ntBASIC20.7■□□□□ 0.9
CREB3L1Q96BA8 DUX4L23-201ENST00000615195 1269 ntBASIC20.7■□□□□ 0.9
CREB3L1Q96BA8 DUX4L24-201ENST00000617576 1269 ntBASIC20.7■□□□□ 0.9
CREB3L1Q96BA8 DUX4L22-201ENST00000618238 1269 ntBASIC20.7■□□□□ 0.9
CREB3L1Q96BA8 DUX4L20-201ENST00000619712 1269 ntBASIC20.7■□□□□ 0.9
CREB3L1Q96BA8 DUX4L21-201ENST00000622058 1269 ntBASIC20.7■□□□□ 0.9
CREB3L1Q96BA8 DUX4L10-201ENST00000622460 1267 ntBASIC20.7■□□□□ 0.9
CREB3L1Q96BA8 DUX4L25-201ENST00000624915 1269 ntBASIC20.7■□□□□ 0.9
CREB3L1Q96BA8 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CREB3L1Q96BA8 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CREB3L1Q96BA8 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.69■□□□□ 0.9
CREB3L1Q96BA8 LINC01124-201ENST00000409786 2117 ntBASIC20.69■□□□□ 0.9
CREB3L1Q96BA8 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CREB3L1Q96BA8 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CREB3L1Q96BA8 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CREB3L1Q96BA8 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.69■□□□□ 0.9
CREB3L1Q96BA8 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CREB3L1Q96BA8 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CREB3L1Q96BA8 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CREB3L1Q96BA8 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CREB3L1Q96BA8 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CREB3L1Q96BA8 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CREB3L1Q96BA8 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.68■□□□□ 0.9
CREB3L1Q96BA8 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.68■□□□□ 0.9
CREB3L1Q96BA8 MIR7108-201ENST00000614319 87 ntBASIC20.68■□□□□ 0.9
CREB3L1Q96BA8 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.68■□□□□ 0.9
CREB3L1Q96BA8 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.67■□□□□ 0.9
CREB3L1Q96BA8 DUSP8P5-201ENST00000422884 1815 ntBASIC20.67■□□□□ 0.9
CREB3L1Q96BA8 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.67■□□□□ 0.9
CREB3L1Q96BA8 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.67■□□□□ 0.9
CREB3L1Q96BA8 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.67■□□□□ 0.9
CREB3L1Q96BA8 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CREB3L1Q96BA8 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CREB3L1Q96BA8 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CREB3L1Q96BA8 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.66■□□□□ 0.9
CREB3L1Q96BA8 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.66■□□□□ 0.9
CREB3L1Q96BA8 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CREB3L1Q96BA8 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CREB3L1Q96BA8 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
CREB3L1Q96BA8 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.66■□□□□ 0.9
CREB3L1Q96BA8 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CREB3L1Q96BA8 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CREB3L1Q96BA8 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CREB3L1Q96BA8 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CREB3L1Q96BA8 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CREB3L1Q96BA8 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CREB3L1Q96BA8 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.9
CREB3L1Q96BA8 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CREB3L1Q96BA8 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CREB3L1Q96BA8 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.64■□□□□ 0.89
CREB3L1Q96BA8 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CREB3L1Q96BA8 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CREB3L1Q96BA8 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CREB3L1Q96BA8 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CREB3L1Q96BA8 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CREB3L1Q96BA8 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CREB3L1Q96BA8 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CREB3L1Q96BA8 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CREB3L1Q96BA8 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CREB3L1Q96BA8 AC110285.7-201ENST00000624417 1536 ntBASIC20.63■□□□□ 0.89
CREB3L1Q96BA8 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CREB3L1Q96BA8 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
CREB3L1Q96BA8 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CREB3L1Q96BA8 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CREB3L1Q96BA8 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CREB3L1Q96BA8 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CREB3L1Q96BA8 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
CREB3L1Q96BA8 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CREB3L1Q96BA8 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.63■□□□□ 0.89
CREB3L1Q96BA8 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.62■□□□□ 0.89
CREB3L1Q96BA8 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
CREB3L1Q96BA8 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CREB3L1Q96BA8 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CREB3L1Q96BA8 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms