Protein–RNA interactions for Protein: Q8NEV1

CSNK2A3, Casein kinase II subunit alpha 3, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A3Q8NEV1 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CSNK2A3Q8NEV1 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.69■□□□□ 0.9
CSNK2A3Q8NEV1 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.69■□□□□ 0.9
CSNK2A3Q8NEV1 RP9P-202ENST00000450133 1212 ntBASIC20.69■□□□□ 0.9
CSNK2A3Q8NEV1 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.69■□□□□ 0.9
CSNK2A3Q8NEV1 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CSNK2A3Q8NEV1 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CSNK2A3Q8NEV1 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CSNK2A3Q8NEV1 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CSNK2A3Q8NEV1 AC093323.1-202ENST00000635031 2045 ntBASIC20.68■□□□□ 0.9
CSNK2A3Q8NEV1 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
CSNK2A3Q8NEV1 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.68■□□□□ 0.9
CSNK2A3Q8NEV1 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.68■□□□□ 0.9
CSNK2A3Q8NEV1 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CSNK2A3Q8NEV1 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CSNK2A3Q8NEV1 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CSNK2A3Q8NEV1 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CSNK2A3Q8NEV1 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
CSNK2A3Q8NEV1 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.66■□□□□ 0.9
CSNK2A3Q8NEV1 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CSNK2A3Q8NEV1 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CSNK2A3Q8NEV1 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CSNK2A3Q8NEV1 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
CSNK2A3Q8NEV1 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CSNK2A3Q8NEV1 AC096887.2-201ENST00000623443 1957 ntBASIC20.66■□□□□ 0.9
CSNK2A3Q8NEV1 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CSNK2A3Q8NEV1 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CSNK2A3Q8NEV1 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.65■□□□□ 0.9
CSNK2A3Q8NEV1 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CSNK2A3Q8NEV1 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CSNK2A3Q8NEV1 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.65■□□□□ 0.9
CSNK2A3Q8NEV1 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CSNK2A3Q8NEV1 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CSNK2A3Q8NEV1 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CSNK2A3Q8NEV1 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.65■□□□□ 0.9
CSNK2A3Q8NEV1 AC007029.1-201ENST00000604183 313 ntBASIC20.65■□□□□ 0.9
CSNK2A3Q8NEV1 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CSNK2A3Q8NEV1 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.64■□□□□ 0.9
CSNK2A3Q8NEV1 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CSNK2A3Q8NEV1 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CSNK2A3Q8NEV1 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CSNK2A3Q8NEV1 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
CSNK2A3Q8NEV1 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CSNK2A3Q8NEV1 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CSNK2A3Q8NEV1 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
CSNK2A3Q8NEV1 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CSNK2A3Q8NEV1 AC093536.1-201ENST00000569153 554 ntBASIC20.63■□□□□ 0.89
CSNK2A3Q8NEV1 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.63■□□□□ 0.89
CSNK2A3Q8NEV1 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CSNK2A3Q8NEV1 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CSNK2A3Q8NEV1 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.63■□□□□ 0.89
CSNK2A3Q8NEV1 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CSNK2A3Q8NEV1 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CSNK2A3Q8NEV1 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CSNK2A3Q8NEV1 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.62■□□□□ 0.89
CSNK2A3Q8NEV1 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.62■□□□□ 0.89
CSNK2A3Q8NEV1 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.62■□□□□ 0.89
CSNK2A3Q8NEV1 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.62■□□□□ 0.89
CSNK2A3Q8NEV1 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.62■□□□□ 0.89
CSNK2A3Q8NEV1 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CSNK2A3Q8NEV1 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CSNK2A3Q8NEV1 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CSNK2A3Q8NEV1 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.61■□□□□ 0.89
CSNK2A3Q8NEV1 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.61■□□□□ 0.89
CSNK2A3Q8NEV1 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CSNK2A3Q8NEV1 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CSNK2A3Q8NEV1 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
CSNK2A3Q8NEV1 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CSNK2A3Q8NEV1 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
CSNK2A3Q8NEV1 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CSNK2A3Q8NEV1 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CSNK2A3Q8NEV1 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.6■□□□□ 0.89
CSNK2A3Q8NEV1 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CSNK2A3Q8NEV1 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.6■□□□□ 0.89
CSNK2A3Q8NEV1 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CSNK2A3Q8NEV1 RNF126P1-201ENST00000567452 1320 ntBASIC20.59■□□□□ 0.89
CSNK2A3Q8NEV1 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CSNK2A3Q8NEV1 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CSNK2A3Q8NEV1 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CSNK2A3Q8NEV1 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CSNK2A3Q8NEV1 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.59■□□□□ 0.89
CSNK2A3Q8NEV1 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.59■□□□□ 0.89
CSNK2A3Q8NEV1 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CSNK2A3Q8NEV1 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CSNK2A3Q8NEV1 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CSNK2A3Q8NEV1 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CSNK2A3Q8NEV1 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CSNK2A3Q8NEV1 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CSNK2A3Q8NEV1 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CSNK2A3Q8NEV1 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CSNK2A3Q8NEV1 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CSNK2A3Q8NEV1 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CSNK2A3Q8NEV1 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CSNK2A3Q8NEV1 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CSNK2A3Q8NEV1 AC097639.1-201ENST00000565519 1891 ntBASIC20.56■□□□□ 0.88
CSNK2A3Q8NEV1 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CSNK2A3Q8NEV1 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CSNK2A3Q8NEV1 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CSNK2A3Q8NEV1 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CSNK2A3Q8NEV1 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms