Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 SNAI3-AS1-204ENST00000567997 2048 ntBASIC22.72■■□□□ 1.23
ARHGEF39Q8N4T4 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
ARHGEF39Q8N4T4 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
ARHGEF39Q8N4T4 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
ARHGEF39Q8N4T4 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
ARHGEF39Q8N4T4 HYI-210ENST00000486909 905 ntTSL 5 BASIC22.71■■□□□ 1.23
ARHGEF39Q8N4T4 AC010980.1-201ENST00000587192 1142 ntBASIC22.71■■□□□ 1.23
ARHGEF39Q8N4T4 AC019171.1-201ENST00000601251 1056 ntBASIC22.71■■□□□ 1.23
ARHGEF39Q8N4T4 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
ARHGEF39Q8N4T4 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
ARHGEF39Q8N4T4 DUSP8P4-201ENST00000399538 1761 ntBASIC22.71■■□□□ 1.23
ARHGEF39Q8N4T4 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.23
ARHGEF39Q8N4T4 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
ARHGEF39Q8N4T4 BEX3-202ENST00000372634 753 ntTSL 2 BASIC22.7■■□□□ 1.22
ARHGEF39Q8N4T4 IDNK-201ENST00000376417 511 ntTSL 5 BASIC22.7■■□□□ 1.22
ARHGEF39Q8N4T4 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
ARHGEF39Q8N4T4 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC22.7■■□□□ 1.22
ARHGEF39Q8N4T4 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
ARHGEF39Q8N4T4 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC22.7■■□□□ 1.22
ARHGEF39Q8N4T4 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
ARHGEF39Q8N4T4 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
ARHGEF39Q8N4T4 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
ARHGEF39Q8N4T4 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
ARHGEF39Q8N4T4 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
ARHGEF39Q8N4T4 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
ARHGEF39Q8N4T4 AC139795.1-202ENST00000500444 432 ntBASIC22.69■■□□□ 1.22
ARHGEF39Q8N4T4 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC22.69■■□□□ 1.22
ARHGEF39Q8N4T4 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
ARHGEF39Q8N4T4 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC22.68■■□□□ 1.22
ARHGEF39Q8N4T4 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
ARHGEF39Q8N4T4 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC22.68■■□□□ 1.22
ARHGEF39Q8N4T4 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
ARHGEF39Q8N4T4 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC22.67■■□□□ 1.22
ARHGEF39Q8N4T4 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
ARHGEF39Q8N4T4 MTX2-204ENST00000443241 799 ntTSL 3 BASIC22.67■■□□□ 1.22
ARHGEF39Q8N4T4 BHLHE23-202ENST00000612929 1109 ntBASIC22.67■■□□□ 1.22
ARHGEF39Q8N4T4 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
ARHGEF39Q8N4T4 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
ARHGEF39Q8N4T4 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC22.66■■□□□ 1.22
ARHGEF39Q8N4T4 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
ARHGEF39Q8N4T4 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC22.66■■□□□ 1.22
ARHGEF39Q8N4T4 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
ARHGEF39Q8N4T4 AC103834.1-201ENST00000520383 144 ntBASIC22.66■■□□□ 1.22
ARHGEF39Q8N4T4 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC22.66■■□□□ 1.22
ARHGEF39Q8N4T4 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
ARHGEF39Q8N4T4 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
ARHGEF39Q8N4T4 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC22.65■■□□□ 1.22
ARHGEF39Q8N4T4 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
ARHGEF39Q8N4T4 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC22.65■■□□□ 1.22
ARHGEF39Q8N4T4 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC22.65■■□□□ 1.22
ARHGEF39Q8N4T4 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC22.65■■□□□ 1.22
ARHGEF39Q8N4T4 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC22.65■■□□□ 1.22
ARHGEF39Q8N4T4 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ARHGEF39Q8N4T4 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.22
ARHGEF39Q8N4T4 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC22.64■■□□□ 1.22
ARHGEF39Q8N4T4 AC145676.1-201ENST00000514988 2004 ntBASIC22.64■■□□□ 1.22
ARHGEF39Q8N4T4 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC22.64■■□□□ 1.21
ARHGEF39Q8N4T4 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC22.64■■□□□ 1.21
ARHGEF39Q8N4T4 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
ARHGEF39Q8N4T4 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
ARHGEF39Q8N4T4 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
ARHGEF39Q8N4T4 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC22.63■■□□□ 1.21
ARHGEF39Q8N4T4 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC22.63■■□□□ 1.21
ARHGEF39Q8N4T4 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
ARHGEF39Q8N4T4 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ARHGEF39Q8N4T4 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ARHGEF39Q8N4T4 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
ARHGEF39Q8N4T4 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
ARHGEF39Q8N4T4 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
ARHGEF39Q8N4T4 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
ARHGEF39Q8N4T4 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC22.62■■□□□ 1.21
ARHGEF39Q8N4T4 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
ARHGEF39Q8N4T4 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC22.62■■□□□ 1.21
ARHGEF39Q8N4T4 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
ARHGEF39Q8N4T4 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
ARHGEF39Q8N4T4 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
ARHGEF39Q8N4T4 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC22.61■■□□□ 1.21
ARHGEF39Q8N4T4 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
ARHGEF39Q8N4T4 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC22.61■■□□□ 1.21
ARHGEF39Q8N4T4 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
ARHGEF39Q8N4T4 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
ARHGEF39Q8N4T4 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
ARHGEF39Q8N4T4 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
ARHGEF39Q8N4T4 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
ARHGEF39Q8N4T4 RARRES2P1-201ENST00000474487 481 ntBASIC22.6■■□□□ 1.21
ARHGEF39Q8N4T4 MIR4508-201ENST00000584178 70 ntBASIC22.6■■□□□ 1.21
ARHGEF39Q8N4T4 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
ARHGEF39Q8N4T4 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
ARHGEF39Q8N4T4 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
ARHGEF39Q8N4T4 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC22.6■■□□□ 1.21
ARHGEF39Q8N4T4 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
ARHGEF39Q8N4T4 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC22.59■■□□□ 1.21
ARHGEF39Q8N4T4 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
ARHGEF39Q8N4T4 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
ARHGEF39Q8N4T4 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
ARHGEF39Q8N4T4 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
ARHGEF39Q8N4T4 AC097639.1-201ENST00000565519 1891 ntBASIC22.58■■□□□ 1.21
ARHGEF39Q8N4T4 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC22.58■■□□□ 1.21
ARHGEF39Q8N4T4 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
ARHGEF39Q8N4T4 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC22.58■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 255.2 ms