Protein–RNA interactions for Protein: Q08285

RRP40, Exosome complex component RRP40, yeastyeast

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP40Q08285 ENV7YPL236C 1095 nt5.65□□□□□ -1.5
RRP40Q08285 MNS1YJR131W 1650 nt5.65□□□□□ -1.51
RRP40Q08285 ATG4YNL223W 1485 nt5.64□□□□□ -1.51
RRP40Q08285 PYK2YOR347C 1521 nt5.64□□□□□ -1.51
RRP40Q08285 PRI2YKL045W 1587 nt5.64□□□□□ -1.51
RRP40Q08285 COX20YDR231C 618 nt5.64□□□□□ -1.51
RRP40Q08285 PHB1YGR132C 864 nt5.64□□□□□ -1.51
RRP40Q08285 TIF2YJL138C 1188 nt5.64□□□□□ -1.51
RRP40Q08285 TIF1YKR059W 1188 nt5.64□□□□□ -1.51
RRP40Q08285 CIN4YMR138W 576 nt5.64□□□□□ -1.51
RRP40Q08285 FRS2YFL022C 1512 nt5.64□□□□□ -1.51
RRP40Q08285 MRC1YCL061C 3291 nt5.63□□□□□ -1.51
RRP40Q08285 YML083CYML083C 1257 nt5.63□□□□□ -1.51
RRP40Q08285 PGK1YCR012W 1251 nt5.62□□□□□ -1.51
RRP40Q08285 ICT1YLR099C 1185 nt5.62□□□□□ -1.51
RRP40Q08285 MRPS5YBR251W 924 nt5.62□□□□□ -1.51
RRP40Q08285 LSG1YGL099W 1923 nt5.62□□□□□ -1.51
RRP40Q08285 PAT1YCR077C 2391 nt5.62□□□□□ -1.51
RRP40Q08285 PRS2YER099C 957 nt5.61□□□□□ -1.51
RRP40Q08285 BZZ1YHR114W 1902 nt5.61□□□□□ -1.51
RRP40Q08285 GPB2YAL056W 2643 nt5.61□□□□□ -1.51
RRP40Q08285 YLR126CYLR126C 756 nt5.61□□□□□ -1.51
RRP40Q08285 ARA2YMR041C 1008 nt5.61□□□□□ -1.51
RRP40Q08285 YNL017CYNL017C 339 nt5.61□□□□□ -1.51
RRP40Q08285 MRP51YPL118W 1035 nt5.61□□□□□ -1.51
RRP40Q08285 GLN1YPR035W 1113 nt5.61□□□□□ -1.51
RRP40Q08285 YHL017WYHL017W 1599 nt5.6□□□□□ -1.51
RRP40Q08285 GPA2YER020W 1350 nt5.6□□□□□ -1.51
RRP40Q08285 YML012C-AYML012C-A 378 nt5.6□□□□□ -1.51
RRP40Q08285 YOL163WYOL163W 510 nt5.6□□□□□ -1.51
RRP40Q08285 DFM1YDR411C 1026 nt5.59□□□□□ -1.51
RRP40Q08285 IFA38YBR159W 1044 nt5.59□□□□□ -1.51
RRP40Q08285 MCM3YEL032W 2916 nt5.59□□□□□ -1.51
RRP40Q08285 EHD3YDR036C 1503 nt5.58□□□□□ -1.52
RRP40Q08285 VPS5YOR069W 2028 nt5.58□□□□□ -1.52
RRP40Q08285 MNN5YJL186W 1761 nt5.58□□□□□ -1.52
RRP40Q08285 RPN11YFR004W 921 nt5.58□□□□□ -1.52
RRP40Q08285 HSP150YJL159W 1242 nt5.58□□□□□ -1.52
RRP40Q08285 SEN34YAR008W 828 nt5.58□□□□□ -1.52
RRP40Q08285 GEP5YLR091W 882 nt5.58□□□□□ -1.52
RRP40Q08285 YPL102CYPL102C 303 nt5.58□□□□□ -1.52
RRP40Q08285 CNE1YAL058W 1509 nt5.58□□□□□ -1.52
RRP40Q08285 YOL036WYOL036W 2286 nt5.58□□□□□ -1.52
RRP40Q08285 CIT3YPR001W 1461 nt5.58□□□□□ -1.52
RRP40Q08285 YDL022C-AYDL022C-A 249 nt5.57□□□□□ -1.52
RRP40Q08285 YNR040WYNR040W 771 nt5.57□□□□□ -1.52
RRP40Q08285 UBC11YOR339C 471 nt5.57□□□□□ -1.52
RRP40Q08285 YPL041CYPL041C 624 nt5.57□□□□□ -1.52
RRP40Q08285 GFA1YKL104C 2154 nt5.57□□□□□ -1.52
RRP40Q08285 TEL2YGR099W 2067 nt5.57□□□□□ -1.52
RRP40Q08285 CLB2YPR119W 1476 nt5.57□□□□□ -1.52
RRP40Q08285 COR1YBL045C 1374 nt5.56□□□□□ -1.52
RRP40Q08285 PRP24YMR268C 1335 nt5.56□□□□□ -1.52
RRP40Q08285 UGX2YDL169C 672 nt5.56□□□□□ -1.52
RRP40Q08285 SUP19tS(UGA)E 82 nt5.56□□□□□ -1.52
RRP40Q08285 SUP17tS(UGA)I 82 nt5.56□□□□□ -1.52
RRP40Q08285 SUP16tS(UGA)P 82 nt5.56□□□□□ -1.52
RRP40Q08285 SUP2tY(GUA)D 75 nt5.56□□□□□ -1.52
RRP40Q08285 SUP11tY(GUA)F1 75 nt5.56□□□□□ -1.52
RRP40Q08285 SUP6tY(GUA)F2 75 nt5.56□□□□□ -1.52
RRP40Q08285 SUP7tY(GUA)J1 75 nt5.56□□□□□ -1.52
RRP40Q08285 SUP4tY(GUA)J2 75 nt5.56□□□□□ -1.52
RRP40Q08285 SUP5tY(GUA)M1 75 nt5.56□□□□□ -1.52
RRP40Q08285 SUP8tY(GUA)M2 75 nt5.56□□□□□ -1.52
RRP40Q08285 SUP3tY(GUA)O 75 nt5.56□□□□□ -1.52
RRP40Q08285 MRS1YIR021W 1092 nt5.56□□□□□ -1.52
RRP40Q08285 YPR123CYPR123C 435 nt5.56□□□□□ -1.52
RRP40Q08285 TRP5YGL026C 2124 nt5.56□□□□□ -1.52
RRP40Q08285 ISN1YOR155C 1353 nt5.55□□□□□ -1.52
RRP40Q08285 YFL042CYFL042C 2025 nt5.55□□□□□ -1.52
RRP40Q08285 MSS1YMR023C 1581 nt5.55□□□□□ -1.52
RRP40Q08285 ATF1YOR377W 1578 nt5.55□□□□□ -1.52
RRP40Q08285 SHO1YER118C 1104 nt5.55□□□□□ -1.52
RRP40Q08285 SPO7YAL009W 780 nt5.55□□□□□ -1.52
RRP40Q08285 EFM3YJR129C 1020 nt5.55□□□□□ -1.52
RRP40Q08285 ATP4YPL078C 735 nt5.55□□□□□ -1.52
RRP40Q08285 ATG12YBR217W 561 nt5.55□□□□□ -1.52
RRP40Q08285 TKL1YPR074C 2043 nt5.55□□□□□ -1.52
RRP40Q08285 PTK2YJR059W 2457 nt5.54□□□□□ -1.52
RRP40Q08285 SHP1YBL058W 1272 nt5.54□□□□□ -1.52
RRP40Q08285 IMA2YOL157C 1770 nt5.54□□□□□ -1.52
RRP40Q08285 GIT1YCR098C 1557 nt5.54□□□□□ -1.52
RRP40Q08285 YDR109CYDR109C 2148 nt5.53□□□□□ -1.52
RRP40Q08285 APE3YBR286W 1614 nt5.53□□□□□ -1.52
RRP40Q08285 AMA1YGR225W 1782 nt5.53□□□□□ -1.52
RRP40Q08285 ASK1YKL052C 879 nt5.53□□□□□ -1.52
RRP40Q08285 RHO4YKR055W 876 nt5.53□□□□□ -1.52
RRP40Q08285 AAD15YOL165C 432 nt5.53□□□□□ -1.52
RRP40Q08285 YBR144CYBR144C 315 nt5.53□□□□□ -1.52
RRP40Q08285 CRZ1YNL027W 2037 nt5.53□□□□□ -1.52
RRP40Q08285 RAD3YER171W 2337 nt5.53□□□□□ -1.52
RRP40Q08285 HAP2YGL237C 798 nt5.52□□□□□ -1.53
RRP40Q08285 DJP1YIR004W 1299 nt5.52□□□□□ -1.53
RRP40Q08285 IDP3YNL009W 1263 nt5.52□□□□□ -1.53
RRP40Q08285 YOR200WYOR200W 399 nt5.52□□□□□ -1.53
RRP40Q08285 MRK1YDL079C 1506 nt5.52□□□□□ -1.53
RRP40Q08285 XBP1YIL101C 1944 nt5.52□□□□□ -1.53
RRP40Q08285 YJU3YKL094W 942 nt5.51□□□□□ -1.53
RRP40Q08285 SNN1YNL086W 309 nt5.51□□□□□ -1.53
RRP40Q08285 ALD6YPL061W 1503 nt5.5□□□□□ -1.53
Retrieved 100 of 7,029 protein–RNA pairs in 31 ms