Protein–RNA interactions for Protein: Q06406

LSM6, U6 snRNA-associated Sm-like protein LSm6, yeast

Known RBP Predictions only

Length 86 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
LSM6	Q06406	SRL2	YLR082C	1179 nt		4.26	□□□□□ -1.73
LSM6	Q06406	CAM1	YPL048W	1248 nt		4.26	□□□□□ -1.73
LSM6	Q06406	COX11	YPL132W	903 nt		4.26	□□□□□ -1.73
LSM6	Q06406	YPR098C	YPR098C	486 nt		4.26	□□□□□ -1.73
LSM6	Q06406	PAP2	YOL115W	1755 nt		4.26	□□□□□ -1.73
LSM6	Q06406	YRF1-4	YLR466W	4149 nt		4.26	□□□□□ -1.73
LSM6	Q06406	ZWF1	YNL241C	1518 nt		4.26	□□□□□ -1.73
LSM6	Q06406	BUD14	YAR014C	2130 nt		4.25	□□□□□ -1.73
LSM6	Q06406	GPD1	YDL022W	1176 nt		4.25	□□□□□ -1.73
LSM6	Q06406	BUG1	YDL099W	1026 nt		4.25	□□□□□ -1.73
LSM6	Q06406	MRF1	YGL143C	1242 nt		4.25	□□□□□ -1.73
LSM6	Q06406	tR(ACG)D	tR(ACG)D	73 nt		4.25	□□□□□ -1.73
LSM6	Q06406	tR(ACG)E	tR(ACG)E	73 nt		4.25	□□□□□ -1.73
LSM6	Q06406	tR(ACG)K	tR(ACG)K	73 nt		4.25	□□□□□ -1.73
LSM6	Q06406	tR(ACG)L	tR(ACG)L	73 nt		4.25	□□□□□ -1.73
LSM6	Q06406	tR(ACG)O	tR(ACG)O	73 nt		4.25	□□□□□ -1.73
LSM6	Q06406	SET5	YHR207C	1581 nt		4.25	□□□□□ -1.73
LSM6	Q06406	PAU19	YMR325W	375 nt		4.25	□□□□□ -1.73
LSM6	Q06406	YOR300W	YOR300W	309 nt		4.25	□□□□□ -1.73
LSM6	Q06406	GYP1	YOR070C	1914 nt		4.25	□□□□□ -1.73
LSM6	Q06406	CCT8	YJL008C	1707 nt		4.24	□□□□□ -1.73
LSM6	Q06406	ATF1	YOR377W	1578 nt		4.24	□□□□□ -1.73
LSM6	Q06406	MCM3	YEL032W	2916 nt		4.24	□□□□□ -1.73
LSM6	Q06406	DIA3	YDL024C	1407 nt		4.24	□□□□□ -1.73
LSM6	Q06406	YFR052C-A	YFR052C-A	306 nt		4.24	□□□□□ -1.73
LSM6	Q06406	POR2	YIL114C	846 nt		4.24	□□□□□ -1.73
LSM6	Q06406	RPS3	YNL178W	723 nt		4.24	□□□□□ -1.73
LSM6	Q06406	MSO1	YNR049C	633 nt		4.24	□□□□□ -1.73
LSM6	Q06406	MDY2	YOL111C	639 nt		4.24	□□□□□ -1.73
LSM6	Q06406	PTC4	YBR125C	1182 nt		4.24	□□□□□ -1.73
LSM6	Q06406	Q0010	Q0010	387 nt		4.24	□□□□□ -1.73
LSM6	Q06406	ACS2	YLR153C	2052 nt		4.24	□□□□□ -1.73
LSM6	Q06406	VRP1	YLR337C	2454 nt		4.24	□□□□□ -1.73
LSM6	Q06406	HAP1	YLR256W	4509 nt		4.23	□□□□□ -1.73
LSM6	Q06406	YJL163C	YJL163C	1668 nt		4.23	□□□□□ -1.73
LSM6	Q06406	YDL121C	YDL121C	450 nt		4.23	□□□□□ -1.73
LSM6	Q06406	PTH2	YBL057C	627 nt		4.23	□□□□□ -1.73
LSM6	Q06406	TSR3	YOR006C	942 nt		4.23	□□□□□ -1.73
LSM6	Q06406	DPH2	YKL191W	1605 nt		4.23	□□□□□ -1.73
LSM6	Q06406	NSE5	YML023C	1671 nt		4.22	□□□□□ -1.73
LSM6	Q06406	RPT4	YOR259C	1314 nt		4.22	□□□□□ -1.73
LSM6	Q06406	PKC1	YBL105C	3456 nt		4.22	□□□□□ -1.73
LSM6	Q06406	GFA1	YKL104C	2154 nt		4.22	□□□□□ -1.73
LSM6	Q06406	MRP1	YDR347W	966 nt		4.22	□□□□□ -1.73
LSM6	Q06406	YKL102C	YKL102C	306 nt		4.22	□□□□□ -1.73
LSM6	Q06406	YLR358C	YLR358C	564 nt		4.22	□□□□□ -1.73
LSM6	Q06406	TSA1	YML028W	591 nt		4.22	□□□□□ -1.73
LSM6	Q06406	MRPL10	YNL284C	969 nt		4.22	□□□□□ -1.73
LSM6	Q06406	NRM1	YNR009W	750 nt		4.22	□□□□□ -1.73
LSM6	Q06406	YOR343C	YOR343C	327 nt		4.22	□□□□□ -1.73
LSM6	Q06406	TAE1	YBR261C	699 nt		4.22	□□□□□ -1.73
LSM6	Q06406	TAH18	YPR048W	1872 nt		4.22	□□□□□ -1.73
LSM6	Q06406	PWP1	YLR196W	1731 nt		4.21	□□□□□ -1.73
LSM6	Q06406	EIS1	YMR031C	2532 nt		4.21	□□□□□ -1.74
LSM6	Q06406	STM1	YLR150W	822 nt		4.21	□□□□□ -1.74
LSM6	Q06406	SPG4	YMR107W	348 nt		4.21	□□□□□ -1.74
LSM6	Q06406	PDH1	YPR002W	1551 nt		4.21	□□□□□ -1.74
LSM6	Q06406	MCX1	YBR227C	1563 nt		4.21	□□□□□ -1.74
LSM6	Q06406	UTP4	YDR324C	2331 nt		4.21	□□□□□ -1.74
LSM6	Q06406	EXO1	YOR033C	2109 nt		4.21	□□□□□ -1.74
LSM6	Q06406	SEC12	YNR026C	1416 nt		4.21	□□□□□ -1.74
LSM6	Q06406	BNA5	YLR231C	1362 nt		4.2	□□□□□ -1.74
LSM6	Q06406	KSS1	YGR040W	1107 nt		4.2	□□□□□ -1.74
LSM6	Q06406	SSY5	YJL156C	2100 nt		4.2	□□□□□ -1.74
LSM6	Q06406	YKR041W	YKR041W	753 nt		4.2	□□□□□ -1.74
LSM6	Q06406	FUS3	YBL016W	1062 nt		4.2	□□□□□ -1.74
LSM6	Q06406	PGA2	YNL149C	390 nt		4.2	□□□□□ -1.74
LSM6	Q06406	RRS1	YOR294W	612 nt		4.2	□□□□□ -1.74
LSM6	Q06406	YPL062W	YPL062W	405 nt		4.2	□□□□□ -1.74
LSM6	Q06406	ATP4	YPL078C	735 nt		4.2	□□□□□ -1.74
LSM6	Q06406	RBD2	YPL246C	789 nt		4.2	□□□□□ -1.74
LSM6	Q06406	YPR076W	YPR076W	375 nt		4.2	□□□□□ -1.74
LSM6	Q06406	GRS1	YBR121C	2004 nt		4.2	□□□□□ -1.74
LSM6	Q06406	SSZ1	YHR064C	1617 nt		4.2	□□□□□ -1.74
LSM6	Q06406	CYK3	YDL117W	2658 nt		4.19	□□□□□ -1.74
LSM6	Q06406	YNL095C	YNL095C	1929 nt		4.19	□□□□□ -1.74
LSM6	Q06406	PIH1	YHR034C	1035 nt		4.19	□□□□□ -1.74
LSM6	Q06406	GFD1	YMR255W	567 nt		4.19	□□□□□ -1.74
LSM6	Q06406	BUB3	YOR026W	1026 nt		4.19	□□□□□ -1.74
LSM6	Q06406	MBF1	YOR298C-A	456 nt		4.19	□□□□□ -1.74
LSM6	Q06406	ASR1	YPR093C	867 nt		4.19	□□□□□ -1.74
LSM6	Q06406	EHD3	YDR036C	1503 nt		4.18	□□□□□ -1.74
LSM6	Q06406	ATE1	YGL017W	1512 nt		4.18	□□□□□ -1.74
LSM6	Q06406	YGR176W	YGR176W	348 nt		4.18	□□□□□ -1.74
LSM6	Q06406	ECM33	YBR078W	1290 nt		4.18	□□□□□ -1.74
LSM6	Q06406	FET3	YMR058W	1911 nt		4.18	□□□□□ -1.74
LSM6	Q06406	RIM15	YFL033C	5313 nt		4.17	□□□□□ -1.74
LSM6	Q06406	YDR396W	YDR396W	501 nt		4.17	□□□□□ -1.74
LSM6	Q06406	YEL068C	YEL068C	333 nt		4.17	□□□□□ -1.74
LSM6	Q06406	DBP8	YHR169W	1296 nt		4.17	□□□□□ -1.74
LSM6	Q06406	RHO3	YIL118W	696 nt		4.17	□□□□□ -1.74
LSM6	Q06406	FPR3	YML074C	1236 nt		4.17	□□□□□ -1.74
LSM6	Q06406	YNL019C	YNL019C	855 nt		4.17	□□□□□ -1.74
LSM6	Q06406	YNL033W	YNL033W	855 nt		4.17	□□□□□ -1.74
LSM6	Q06406	CST26	YBR042C	1194 nt		4.17	□□□□□ -1.74
LSM6	Q06406	YPR114W	YPR114W	948 nt		4.17	□□□□□ -1.74
LSM6	Q06406	YKR023W	YKR023W	1593 nt		4.17	□□□□□ -1.74
LSM6	Q06406	RAD53	YPL153C	2466 nt		4.16	□□□□□ -1.74
LSM6	Q06406	PPH21	YDL134C	1110 nt		4.16	□□□□□ -1.74
LSM6	Q06406	PHM8	YER037W	966 nt		4.16	□□□□□ -1.74

Retrieved 100 of 7,029 protein–RNA pairs in 12.1 ms