Protein–RNA interactions for Protein: P54000

SUB1, RNA polymerase II transcriptional coactivator SUB1, yeastyeast

Known RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SUB1P54000 SMX3YPR182W 261 nt6.73□□□□□ -1.33
SUB1P54000 CLA4YNL298W 2529 nt6.73□□□□□ -1.33
SUB1P54000 UTP4YDR324C 2331 nt6.72□□□□□ -1.33
SUB1P54000 YGL102CYGL102C 429 nt6.72□□□□□ -1.33
SUB1P54000 CAB4YGR277C 918 nt6.72□□□□□ -1.33
SUB1P54000 MMR1YLR190W 1476 nt6.72□□□□□ -1.33
SUB1P54000 MSY1YPL097W 1479 nt6.72□□□□□ -1.33
SUB1P54000 RAD53YPL153C 2466 nt6.71□□□□□ -1.33
SUB1P54000 HED1YDR014W-A 489 nt6.71□□□□□ -1.34
SUB1P54000 YGR291CYGR291C 222 nt6.71□□□□□ -1.34
SUB1P54000 YLR358CYLR358C 564 nt6.71□□□□□ -1.34
SUB1P54000 FUS3YBL016W 1062 nt6.71□□□□□ -1.34
SUB1P54000 HTZ1YOL012C 405 nt6.71□□□□□ -1.34
SUB1P54000 YPQ1YOL092W 927 nt6.71□□□□□ -1.34
SUB1P54000 YBR298C-AYBR298C-A 222 nt6.71□□□□□ -1.34
SUB1P54000 FAA4YMR246W 2085 nt6.71□□□□□ -1.34
SUB1P54000 YTA12YMR089C 2478 nt6.71□□□□□ -1.34
SUB1P54000 TPO3YPR156C 1869 nt6.7□□□□□ -1.34
SUB1P54000 GEF1YJR040W 2340 nt6.7□□□□□ -1.34
SUB1P54000 MSC3YLR219W 2187 nt6.7□□□□□ -1.34
SUB1P54000 RAM1YDL090C 1296 nt6.7□□□□□ -1.34
SUB1P54000 PRI1YIR008C 1230 nt6.7□□□□□ -1.34
SUB1P54000 YLR123CYLR123C 330 nt6.7□□□□□ -1.34
SUB1P54000 YLR312CYLR312C 1197 nt6.7□□□□□ -1.34
SUB1P54000 RPC19YNL113W 429 nt6.7□□□□□ -1.34
SUB1P54000 YNL120CYNL120C 486 nt6.7□□□□□ -1.34
SUB1P54000 GPI11YDR302W 660 nt6.69□□□□□ -1.34
SUB1P54000 DUS4YLR405W 1104 nt6.69□□□□□ -1.34
SUB1P54000 GTR1YML121W 933 nt6.69□□□□□ -1.34
SUB1P54000 NRM1YNR009W 750 nt6.69□□□□□ -1.34
SUB1P54000 YOR292CYOR292C 930 nt6.69□□□□□ -1.34
SUB1P54000 UBP7YIL156W 3216 nt6.68□□□□□ -1.34
SUB1P54000 SPS18YNL204C 903 nt6.68□□□□□ -1.34
SUB1P54000 YPL250W-AYPL250W-A 288 nt6.68□□□□□ -1.34
SUB1P54000 YCL049CYCL049C 939 nt6.68□□□□□ -1.34
SUB1P54000 COQ1YBR003W 1422 nt6.67□□□□□ -1.34
SUB1P54000 KEL1YHR158C 3495 nt6.67□□□□□ -1.34
SUB1P54000 ICP55YER078C 1536 nt6.67□□□□□ -1.34
SUB1P54000 GLE2YER107C 1098 nt6.67□□□□□ -1.34
SUB1P54000 TOM20YGR082W 552 nt6.67□□□□□ -1.34
SUB1P54000 TMA46YOR091W 1038 nt6.67□□□□□ -1.34
SUB1P54000 MOD5YOR274W 1287 nt6.67□□□□□ -1.34
SUB1P54000 DOT1YDR440W 1749 nt6.66□□□□□ -1.34
SUB1P54000 NUP49YGL172W 1419 nt6.66□□□□□ -1.34
SUB1P54000 APE4YHR113W 1473 nt6.66□□□□□ -1.34
SUB1P54000 NGL2YMR285C 1548 nt6.66□□□□□ -1.34
SUB1P54000 ERC1YHR032W 1746 nt6.65□□□□□ -1.34
SUB1P54000 DBP9YLR276C 1785 nt6.65□□□□□ -1.34
SUB1P54000 VPS61YDR136C 573 nt6.65□□□□□ -1.34
SUB1P54000 PPM1YDR435C 987 nt6.65□□□□□ -1.34
SUB1P54000 YKR104WYKR104W 921 nt6.65□□□□□ -1.34
SUB1P54000 PML1YLR016C 615 nt6.65□□□□□ -1.34
SUB1P54000 KSH1YNL024C-A 219 nt6.65□□□□□ -1.34
SUB1P54000 snR30snR30 606 nt6.65□□□□□ -1.34
SUB1P54000 RMD9YGL107C 1941 nt6.65□□□□□ -1.34
SUB1P54000 MET3YJR010W 1536 nt6.65□□□□□ -1.35
SUB1P54000 ATG1YGL180W 2694 nt6.64□□□□□ -1.35
SUB1P54000 CPA1YOR303W 1236 nt6.64□□□□□ -1.35
SUB1P54000 ERG10YPL028W 1197 nt6.64□□□□□ -1.35
SUB1P54000 WTM1YOR230W 1314 nt6.64□□□□□ -1.35
SUB1P54000 PCL8YPL219W 1479 nt6.64□□□□□ -1.35
SUB1P54000 EDC2YER035W 438 nt6.63□□□□□ -1.35
SUB1P54000 FMP48YGR052W 1110 nt6.63□□□□□ -1.35
SUB1P54000 TRR2YHR106W 1029 nt6.63□□□□□ -1.35
SUB1P54000 YIR043CYIR043C 693 nt6.63□□□□□ -1.35
SUB1P54000 DID2YKR035W-A 615 nt6.63□□□□□ -1.35
SUB1P54000 YML6YML025C 861 nt6.63□□□□□ -1.35
SUB1P54000 LAP2YNL045W 2016 nt6.63□□□□□ -1.35
SUB1P54000 YNR048WYNR048W 1182 nt6.63□□□□□ -1.35
SUB1P54000 MCM4YPR019W 2802 nt6.62□□□□□ -1.35
SUB1P54000 ARP10YDR106W 855 nt6.62□□□□□ -1.35
SUB1P54000 PHM8YER037W 966 nt6.62□□□□□ -1.35
SUB1P54000 YIL028WYIL028W 399 nt6.62□□□□□ -1.35
SUB1P54000 YLL056CYLL056C 897 nt6.62□□□□□ -1.35
SUB1P54000 MBF1YOR298C-A 456 nt6.62□□□□□ -1.35
SUB1P54000 SMA1YPL027W 738 nt6.62□□□□□ -1.35
SUB1P54000 MRL1YPR079W 1146 nt6.62□□□□□ -1.35
SUB1P54000 RGD1YBR260C 2001 nt6.62□□□□□ -1.35
SUB1P54000 CST6YIL036W 1764 nt6.62□□□□□ -1.35
SUB1P54000 IML2YJL082W 2196 nt6.61□□□□□ -1.35
SUB1P54000 YHR193C-AYHR193C-A 375 nt6.61□□□□□ -1.35
SUB1P54000 YIA6YIL006W 1122 nt6.61□□□□□ -1.35
SUB1P54000 AIM24YJR080C 1185 nt6.61□□□□□ -1.35
SUB1P54000 YJR146WYJR146W 354 nt6.61□□□□□ -1.35
SUB1P54000 OGG1YML060W 1131 nt6.61□□□□□ -1.35
SUB1P54000 MSO1YNR049C 633 nt6.61□□□□□ -1.35
SUB1P54000 RFC4YOL094C 972 nt6.61□□□□□ -1.35
SUB1P54000 AFT1YGL071W 2073 nt6.61□□□□□ -1.35
SUB1P54000 PFK2YMR205C 2880 nt6.6□□□□□ -1.35
SUB1P54000 UGA1YGR019W 1416 nt6.6□□□□□ -1.35
SUB1P54000 SDA1YGR245C 2304 nt6.6□□□□□ -1.35
SUB1P54000 HXT3YDR345C 1704 nt6.6□□□□□ -1.35
SUB1P54000 BUD14YAR014C 2130 nt6.6□□□□□ -1.35
SUB1P54000 YLR346CYLR346C 306 nt6.6□□□□□ -1.35
SUB1P54000 CSR1YLR380W 1227 nt6.6□□□□□ -1.35
SUB1P54000 COQ3YOL096C 939 nt6.6□□□□□ -1.35
SUB1P54000 PAU21YOR394W 495 nt6.6□□□□□ -1.35
SUB1P54000 PAU22YPL282C 495 nt6.6□□□□□ -1.35
SUB1P54000 TIP41YPR040W 1071 nt6.6□□□□□ -1.35
SUB1P54000 VRP1YLR337C 2454 nt6.6□□□□□ -1.35
Retrieved 100 of 7,029 protein–RNA pairs in 181 ms