Protein–RNA interactions for Protein: P48067

SLC6A9, Sodium- and chloride-dependent glycine transporter 1, humanhuman

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A9P48067 ECEL1P2-201ENST00000461596 1295 ntBASIC20.97■□□□□ 0.95
SLC6A9P48067 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
SLC6A9P48067 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.96■□□□□ 0.95
SLC6A9P48067 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SLC6A9P48067 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
SLC6A9P48067 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.96■□□□□ 0.95
SLC6A9P48067 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.96■□□□□ 0.95
SLC6A9P48067 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
SLC6A9P48067 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC6A9P48067 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
SLC6A9P48067 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SLC6A9P48067 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC6A9P48067 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.94■□□□□ 0.94
SLC6A9P48067 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SLC6A9P48067 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.94■□□□□ 0.94
SLC6A9P48067 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.94■□□□□ 0.94
SLC6A9P48067 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC6A9P48067 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
SLC6A9P48067 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SLC6A9P48067 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SLC6A9P48067 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
SLC6A9P48067 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.93■□□□□ 0.94
SLC6A9P48067 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.93■□□□□ 0.94
SLC6A9P48067 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.93■□□□□ 0.94
SLC6A9P48067 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
SLC6A9P48067 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.93■□□□□ 0.94
SLC6A9P48067 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
SLC6A9P48067 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC6A9P48067 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC6A9P48067 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
SLC6A9P48067 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
SLC6A9P48067 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC6A9P48067 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
SLC6A9P48067 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
SLC6A9P48067 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SLC6A9P48067 RNF126P1-201ENST00000567452 1320 ntBASIC20.91■□□□□ 0.94
SLC6A9P48067 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
SLC6A9P48067 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC6A9P48067 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SLC6A9P48067 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC6A9P48067 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
SLC6A9P48067 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
SLC6A9P48067 RP9P-202ENST00000450133 1212 ntBASIC20.9■□□□□ 0.94
SLC6A9P48067 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.9■□□□□ 0.94
SLC6A9P48067 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC6A9P48067 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SLC6A9P48067 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.89■□□□□ 0.94
SLC6A9P48067 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SLC6A9P48067 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
SLC6A9P48067 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.89■□□□□ 0.93
SLC6A9P48067 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
SLC6A9P48067 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC6A9P48067 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC6A9P48067 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.88■□□□□ 0.93
SLC6A9P48067 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC6A9P48067 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC6A9P48067 RARRES2P2-201ENST00000394842 485 ntBASIC20.88■□□□□ 0.93
SLC6A9P48067 AC093536.1-201ENST00000569153 554 ntBASIC20.88■□□□□ 0.93
SLC6A9P48067 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.88■□□□□ 0.93
SLC6A9P48067 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC6A9P48067 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
SLC6A9P48067 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.88■□□□□ 0.93
SLC6A9P48067 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC6A9P48067 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.87■□□□□ 0.93
SLC6A9P48067 AC007029.1-201ENST00000604183 313 ntBASIC20.87■□□□□ 0.93
SLC6A9P48067 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SLC6A9P48067 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC6A9P48067 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC6A9P48067 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.87■□□□□ 0.93
SLC6A9P48067 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SLC6A9P48067 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC6A9P48067 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC6A9P48067 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC6A9P48067 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.86■□□□□ 0.93
SLC6A9P48067 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
SLC6A9P48067 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.86■□□□□ 0.93
SLC6A9P48067 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.86■□□□□ 0.93
SLC6A9P48067 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC6A9P48067 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC6A9P48067 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC6A9P48067 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
SLC6A9P48067 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SLC6A9P48067 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC6A9P48067 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.85■□□□□ 0.93
SLC6A9P48067 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC6A9P48067 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC6A9P48067 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
SLC6A9P48067 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC6A9P48067 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
SLC6A9P48067 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC6A9P48067 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SLC6A9P48067 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC6A9P48067 AC097639.1-201ENST00000565519 1891 ntBASIC20.84■□□□□ 0.93
SLC6A9P48067 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC6A9P48067 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC6A9P48067 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SLC6A9P48067 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC6A9P48067 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
SLC6A9P48067 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
SLC6A9P48067 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms