Protein–RNA interactions for Protein: P40438

VTH1, VPS10 homolog 1, yeastyeast

Predictions only

Length 1,549 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VTH1P40438 CRP1YHR146W 1398 nt8.71□□□□□ -1.02
VTH1P40438 SRF1YDL133W 1314 nt8.7□□□□□ -1.02
VTH1P40438 YCR075W-AYCR075W-A 228 nt8.7□□□□□ -1.02
VTH1P40438 SUP19tS(UGA)E 82 nt8.7□□□□□ -1.02
VTH1P40438 SUP17tS(UGA)I 82 nt8.7□□□□□ -1.02
VTH1P40438 SUP16tS(UGA)P 82 nt8.7□□□□□ -1.02
VTH1P40438 LPD1YFL018C 1500 nt8.7□□□□□ -1.02
VTH1P40438 YLL059CYLL059C 507 nt8.7□□□□□ -1.02
VTH1P40438 PRP46YPL151C 1356 nt8.69□□□□□ -1.02
VTH1P40438 NDC1YML031W 1968 nt8.69□□□□□ -1.02
VTH1P40438 YEA6YEL006W 1008 nt8.69□□□□□ -1.02
VTH1P40438 PET112YBL080C 1626 nt8.69□□□□□ -1.02
VTH1P40438 YDR278CYDR278C 318 nt8.68□□□□□ -1.02
VTH1P40438 tN(GUU)CtN(GUU)C 74 nt8.67□□□□□ -1.02
VTH1P40438 tN(GUU)FtN(GUU)F 74 nt8.67□□□□□ -1.02
VTH1P40438 tN(GUU)GtN(GUU)G 74 nt8.67□□□□□ -1.02
VTH1P40438 tN(GUU)KtN(GUU)K 74 nt8.67□□□□□ -1.02
VTH1P40438 tN(GUU)LtN(GUU)L 74 nt8.67□□□□□ -1.02
VTH1P40438 tN(GUU)N1tN(GUU)N1 74 nt8.67□□□□□ -1.02
VTH1P40438 tN(GUU)N2tN(GUU)N2 74 nt8.67□□□□□ -1.02
VTH1P40438 tN(GUU)O1tN(GUU)O1 74 nt8.67□□□□□ -1.02
VTH1P40438 tN(GUU)O2tN(GUU)O2 74 nt8.67□□□□□ -1.02
VTH1P40438 tN(GUU)PtN(GUU)P 74 nt8.67□□□□□ -1.02
VTH1P40438 IPI1YHR085W 1005 nt8.67□□□□□ -1.02
VTH1P40438 ALR1YOL130W 2580 nt8.67□□□□□ -1.02
VTH1P40438 HIS7YBR248C 1659 nt8.67□□□□□ -1.02
VTH1P40438 YLR118CYLR118C 684 nt8.65□□□□□ -1.02
VTH1P40438 YOR318CYOR318C 306 nt8.65□□□□□ -1.02
VTH1P40438 BBP1YPL255W 1158 nt8.65□□□□□ -1.02
VTH1P40438 SEC23YPR181C 2307 nt8.65□□□□□ -1.02
VTH1P40438 DMA1YHR115C 1251 nt8.64□□□□□ -1.03
VTH1P40438 SAM4YPL273W 978 nt8.64□□□□□ -1.03
VTH1P40438 CIS3YJL158C 684 nt8.63□□□□□ -1.03
VTH1P40438 YNL190WYNL190W 615 nt8.62□□□□□ -1.03
VTH1P40438 NPA3YJR072C 1158 nt8.61□□□□□ -1.03
VTH1P40438 YER010CYER010C 705 nt8.6□□□□□ -1.03
VTH1P40438 COX9YDL067C 180 nt8.59□□□□□ -1.03
VTH1P40438 YGR068W-AYGR068W-A 96 nt8.59□□□□□ -1.03
VTH1P40438 ECM15YBL001C 315 nt8.59□□□□□ -1.03
VTH1P40438 AGP2YBR132C 1791 nt8.59□□□□□ -1.03
VTH1P40438 YML082WYML082W 1950 nt8.58□□□□□ -1.04
VTH1P40438 HSP12YFL014W 330 nt8.58□□□□□ -1.04
VTH1P40438 COS9YKL219W 1224 nt8.58□□□□□ -1.04
VTH1P40438 YPR204WYPR204W 3099 nt8.57□□□□□ -1.04
VTH1P40438 MHR1YDR296W 681 nt8.57□□□□□ -1.04
VTH1P40438 UTR4YEL038W 684 nt8.57□□□□□ -1.04
VTH1P40438 YHC3YJL059W 1227 nt8.57□□□□□ -1.04
VTH1P40438 GAT3YLR013W 426 nt8.57□□□□□ -1.04
VTH1P40438 TFS1YLR178C 660 nt8.57□□□□□ -1.04
VTH1P40438 YMR010WYMR010W 1218 nt8.57□□□□□ -1.04
VTH1P40438 SMK1YPR054W 1167 nt8.57□□□□□ -1.04
VTH1P40438 YUR1YJL139C 1287 nt8.56□□□□□ -1.04
VTH1P40438 YML083CYML083C 1257 nt8.56□□□□□ -1.04
VTH1P40438 LAS17YOR181W 1902 nt8.56□□□□□ -1.04
VTH1P40438 NPP1YCR026C 2229 nt8.56□□□□□ -1.04
VTH1P40438 SHE10YGL228W 1734 nt8.55□□□□□ -1.04
VTH1P40438 ARG81YML099C 2643 nt8.55□□□□□ -1.04
VTH1P40438 COT1YOR316C 1320 nt8.55□□□□□ -1.04
VTH1P40438 CWC21YDR482C 408 nt8.54□□□□□ -1.04
VTH1P40438 YHR127WYHR127W 732 nt8.54□□□□□ -1.04
VTH1P40438 YOL097W-AYOL097W-A 186 nt8.54□□□□□ -1.04
VTH1P40438 YME1YPR024W 2244 nt8.54□□□□□ -1.04
VTH1P40438 MMP1YLL061W 1752 nt8.54□□□□□ -1.04
VTH1P40438 YJU3YKL094W 942 nt8.54□□□□□ -1.04
VTH1P40438 YHR131CYHR131C 2553 nt8.53□□□□□ -1.04
VTH1P40438 GET3YDL100C 1065 nt8.53□□□□□ -1.04
VTH1P40438 COX26YDR119W-A 201 nt8.53□□□□□ -1.04
VTH1P40438 LYS12YIL094C 1116 nt8.53□□□□□ -1.04
VTH1P40438 PIN2YOR104W 849 nt8.53□□□□□ -1.04
VTH1P40438 MOD5YOR274W 1287 nt8.53□□□□□ -1.04
VTH1P40438 ECM38YLR299W 1983 nt8.5□□□□□ -1.05
VTH1P40438 YML133CYML133C 4125 nt8.5□□□□□ -1.05
VTH1P40438 DUS4YLR405W 1104 nt8.49□□□□□ -1.05
VTH1P40438 PHO8YDR481C 1701 nt8.49□□□□□ -1.05
VTH1P40438 DIA3YDL024C 1407 nt8.49□□□□□ -1.05
VTH1P40438 HCR1YLR192C 798 nt8.49□□□□□ -1.05
VTH1P40438 YNL296WYNL296W 315 nt8.49□□□□□ -1.05
VTH1P40438 RER2YBR002C 861 nt8.49□□□□□ -1.05
VTH1P40438 RQC1YDR333C 2172 nt8.46□□□□□ -1.05
VTH1P40438 SER1YOR184W 1188 nt8.46□□□□□ -1.05
VTH1P40438 TDH3YGR192C 999 nt8.45□□□□□ -1.06
VTH1P40438 YOL163WYOL163W 510 nt8.45□□□□□ -1.06
VTH1P40438 IFA38YBR159W 1044 nt8.45□□□□□ -1.06
VTH1P40438 HAP2YGL237C 798 nt8.44□□□□□ -1.06
VTH1P40438 CBF1YJR060W 1056 nt8.44□□□□□ -1.06
VTH1P40438 MIM2YLR099W-A 264 nt8.44□□□□□ -1.06
VTH1P40438 CBC2YPL178W 627 nt8.44□□□□□ -1.06
VTH1P40438 SUP2tY(GUA)D 75 nt8.44□□□□□ -1.06
VTH1P40438 SUP11tY(GUA)F1 75 nt8.44□□□□□ -1.06
VTH1P40438 SUP6tY(GUA)F2 75 nt8.44□□□□□ -1.06
VTH1P40438 SUP7tY(GUA)J1 75 nt8.44□□□□□ -1.06
VTH1P40438 SUP4tY(GUA)J2 75 nt8.44□□□□□ -1.06
VTH1P40438 SUP5tY(GUA)M1 75 nt8.44□□□□□ -1.06
VTH1P40438 SUP8tY(GUA)M2 75 nt8.44□□□□□ -1.06
VTH1P40438 SUP3tY(GUA)O 75 nt8.44□□□□□ -1.06
VTH1P40438 MRPL4YLR439W 960 nt8.44□□□□□ -1.06
VTH1P40438 RRN10YBL025W 438 nt8.44□□□□□ -1.06
VTH1P40438 EEB1YPL095C 1371 nt8.43□□□□□ -1.06
VTH1P40438 EFM3YJR129C 1020 nt8.43□□□□□ -1.06
VTH1P40438 PGA3YML125C 939 nt8.43□□□□□ -1.06
Retrieved 100 of 7,029 protein–RNA pairs in 12.3 ms