Protein–RNA interactions for Protein: P40089

LSM5, U6 snRNA-associated Sm-like protein LSm5, yeastyeast

Known RBP Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM5P40089 SET5YHR207C 1581 nt6.05□□□□□ -1.44
LSM5P40089 YET3YDL072C 612 nt6.04□□□□□ -1.44
LSM5P40089 ADK2YER170W 678 nt6.04□□□□□ -1.44
LSM5P40089 IES2YNL215W 963 nt6.04□□□□□ -1.44
LSM5P40089 PDB1YBR221C 1101 nt6.04□□□□□ -1.44
LSM5P40089 YML133CYML133C 4125 nt6.04□□□□□ -1.44
LSM5P40089 FHL1YPR104C 2811 nt6.04□□□□□ -1.44
LSM5P40089 PYC2YBR218C 3543 nt6.04□□□□□ -1.44
LSM5P40089 PCS60YBR222C 1632 nt6.03□□□□□ -1.44
LSM5P40089 PRY3YJL078C 2646 nt6.03□□□□□ -1.44
LSM5P40089 YNL067W-AYNL067W-A 147 nt6.03□□□□□ -1.44
LSM5P40089 RCK1YGL158W 1539 nt6.03□□□□□ -1.44
LSM5P40089 CCC2YDR270W 3015 nt6.03□□□□□ -1.44
LSM5P40089 PTR2YKR093W 1806 nt6.02□□□□□ -1.45
LSM5P40089 POP5YAL033W 522 nt6.02□□□□□ -1.45
LSM5P40089 PEX13YLR191W 1161 nt6.02□□□□□ -1.45
LSM5P40089 HAL1YPR005C 885 nt6.02□□□□□ -1.45
LSM5P40089 PEX32YBR168W 1242 nt6.02□□□□□ -1.45
LSM5P40089 PRP40YKL012W 1752 nt6.01□□□□□ -1.45
LSM5P40089 CEF1YMR213W 1773 nt6.01□□□□□ -1.45
LSM5P40089 YMR135W-AYMR135W-A 534 nt6.01□□□□□ -1.45
LSM5P40089 ILV1YER086W 1731 nt6.01□□□□□ -1.45
LSM5P40089 ARG81YML099C 2643 nt6□□□□□ -1.45
LSM5P40089 VNX1YNL321W 2727 nt6□□□□□ -1.45
LSM5P40089 FOB1YDR110W 1701 nt6□□□□□ -1.45
LSM5P40089 DMA1YHR115C 1251 nt6□□□□□ -1.45
LSM5P40089 AVT4YNL101W 2142 nt6□□□□□ -1.45
LSM5P40089 YMC1YPR058W 924 nt6□□□□□ -1.45
LSM5P40089 VMA2YBR127C 1554 nt6□□□□□ -1.45
LSM5P40089 ICL1YER065C 1674 nt6□□□□□ -1.45
LSM5P40089 YGR139WYGR139W 339 nt5.99□□□□□ -1.45
LSM5P40089 PXL1YKR090W 2121 nt5.99□□□□□ -1.45
LSM5P40089 RSA4YCR072C 1548 nt5.99□□□□□ -1.45
LSM5P40089 EXG1YLR300W 1347 nt5.99□□□□□ -1.45
LSM5P40089 PEX7YDR142C 1128 nt5.98□□□□□ -1.45
LSM5P40089 EAF5YEL018W 840 nt5.98□□□□□ -1.45
LSM5P40089 CAF40YNL288W 1122 nt5.98□□□□□ -1.45
LSM5P40089 NOP2YNL061W 1857 nt5.98□□□□□ -1.45
LSM5P40089 DUG1YFR044C 1446 nt5.98□□□□□ -1.45
LSM5P40089 EIS1YMR031C 2532 nt5.97□□□□□ -1.45
LSM5P40089 YCK1YHR135C 1617 nt5.97□□□□□ -1.45
LSM5P40089 TMT1YER175C 900 nt5.97□□□□□ -1.45
LSM5P40089 ARP1YHR129C 1155 nt5.97□□□□□ -1.45
LSM5P40089 DOT5YIL010W 648 nt5.97□□□□□ -1.45
LSM5P40089 COX17YLL009C 210 nt5.97□□□□□ -1.45
LSM5P40089 JNM1YMR294W 1122 nt5.97□□□□□ -1.45
LSM5P40089 YNL108CYNL108C 813 nt5.97□□□□□ -1.45
LSM5P40089 TKL1YPR074C 2043 nt5.97□□□□□ -1.45
LSM5P40089 PGM1YKL127W 1713 nt5.96□□□□□ -1.45
LSM5P40089 RIO1YOR119C 1455 nt5.96□□□□□ -1.45
LSM5P40089 BUD32YGR262C 786 nt5.96□□□□□ -1.46
LSM5P40089 RPS5YJR123W 678 nt5.96□□□□□ -1.46
LSM5P40089 YNL228WYNL228W 777 nt5.96□□□□□ -1.46
LSM5P40089 ODC2YOR222W 924 nt5.96□□□□□ -1.46
LSM5P40089 YHR070C-AYHR070C-A 411 nt5.95□□□□□ -1.46
LSM5P40089 RPL21AYBR191W 483 nt5.95□□□□□ -1.46
LSM5P40089 NUP1YOR098C 3231 nt5.95□□□□□ -1.46
LSM5P40089 CRP1YHR146W 1398 nt5.94□□□□□ -1.46
LSM5P40089 YDL129WYDL129W 876 nt5.94□□□□□ -1.46
LSM5P40089 LDS1YAL018C 978 nt5.94□□□□□ -1.46
LSM5P40089 GCV3YAL044C 513 nt5.94□□□□□ -1.46
LSM5P40089 UIP4YPL186C 915 nt5.94□□□□□ -1.46
LSM5P40089 AFG1YEL052W 1530 nt5.94□□□□□ -1.46
LSM5P40089 SKS1YPL026C 1509 nt5.94□□□□□ -1.46
LSM5P40089 YLH47YPR125W 1365 nt5.93□□□□□ -1.46
LSM5P40089 GIT1YCR098C 1557 nt5.93□□□□□ -1.46
LSM5P40089 YDR034W-BYDR034W-B 156 nt5.93□□□□□ -1.46
LSM5P40089 YEL068CYEL068C 333 nt5.93□□□□□ -1.46
LSM5P40089 KRE9YJL174W 831 nt5.93□□□□□ -1.46
LSM5P40089 SEC17YBL050W 879 nt5.93□□□□□ -1.46
LSM5P40089 RFA2YNL312W 822 nt5.93□□□□□ -1.46
LSM5P40089 MRPS16YPL013C 366 nt5.93□□□□□ -1.46
LSM5P40089 YPR160C-AYPR160C-A 285 nt5.93□□□□□ -1.46
LSM5P40089 WHI2YOR043W 1461 nt5.93□□□□□ -1.46
LSM5P40089 URA7YBL039C 1740 nt5.93□□□□□ -1.46
LSM5P40089 YTP1YNL237W 1380 nt5.93□□□□□ -1.46
LSM5P40089 QRI1YDL103C 1434 nt5.92□□□□□ -1.46
LSM5P40089 ICS3YJL077C 396 nt5.92□□□□□ -1.46
LSM5P40089 YNL194CYNL194C 906 nt5.92□□□□□ -1.46
LSM5P40089 RRS1YOR294W 612 nt5.92□□□□□ -1.46
LSM5P40089 RAP1YNL216W 2484 nt5.92□□□□□ -1.46
LSM5P40089 GEX1YCL073C 1848 nt5.92□□□□□ -1.46
LSM5P40089 GUP2YPL189W 1830 nt5.92□□□□□ -1.46
LSM5P40089 YIL055CYIL055C 1884 nt5.92□□□□□ -1.46
LSM5P40089 MET7YOR241W 1647 nt5.92□□□□□ -1.46
LSM5P40089 MDM31YHR194W 1740 nt5.91□□□□□ -1.46
LSM5P40089 BSC5YNR069C 1470 nt5.91□□□□□ -1.46
LSM5P40089 GEF1YJR040W 2340 nt5.91□□□□□ -1.46
LSM5P40089 COS6YGR295C 1146 nt5.91□□□□□ -1.46
LSM5P40089 CIS3YJL158C 684 nt5.91□□□□□ -1.46
LSM5P40089 TAF11YML015C 1041 nt5.91□□□□□ -1.46
LSM5P40089 TSA1YML028W 591 nt5.91□□□□□ -1.46
LSM5P40089 BSC4YNL269W 396 nt5.91□□□□□ -1.46
LSM5P40089 ELC1YPL046C 300 nt5.91□□□□□ -1.46
LSM5P40089 HXT2YMR011W 1626 nt5.91□□□□□ -1.46
LSM5P40089 XBP1YIL101C 1944 nt5.91□□□□□ -1.46
LSM5P40089 CLB4YLR210W 1383 nt5.91□□□□□ -1.46
LSM5P40089 IMA5YJL216C 1746 nt5.91□□□□□ -1.46
LSM5P40089 HRQ1YDR291W 3234 nt5.9□□□□□ -1.46
LSM5P40089 TPO3YPR156C 1869 nt5.9□□□□□ -1.46
Retrieved 100 of 7,029 protein–RNA pairs in 11.4 ms