Protein–RNA interactions for Protein: P33991

MCM4, DNA replication licensing factor MCM4, humanhuman

Predictions only

Length 863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCM4P33991 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC28.07■■■□□ 2.08
MCM4P33991 RNF166-209ENST00000567844 633 ntTSL 5 BASIC28.07■■■□□ 2.08
MCM4P33991 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
MCM4P33991 AC110285.7-201ENST00000624417 1536 ntBASIC28.07■■■□□ 2.08
MCM4P33991 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
MCM4P33991 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC28.06■■■□□ 2.08
MCM4P33991 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC28.06■■■□□ 2.08
MCM4P33991 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
MCM4P33991 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
MCM4P33991 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC28.06■■■□□ 2.08
MCM4P33991 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC28.06■■■□□ 2.08
MCM4P33991 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC28.06■■■□□ 2.08
MCM4P33991 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
MCM4P33991 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC28.06■■■□□ 2.08
MCM4P33991 AP003733.4-201ENST00000623785 1697 ntBASIC28.06■■■□□ 2.08
MCM4P33991 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
MCM4P33991 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC28.05■■■□□ 2.08
MCM4P33991 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
MCM4P33991 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC28.04■■■□□ 2.08
MCM4P33991 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
MCM4P33991 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC28.04■■■□□ 2.08
MCM4P33991 DUX4L11-201ENST00000611504 1267 ntBASIC28.04■■■□□ 2.08
MCM4P33991 DUX4L12-201ENST00000614593 1267 ntBASIC28.04■■■□□ 2.08
MCM4P33991 DUX4L14-201ENST00000621227 1267 ntBASIC28.04■■■□□ 2.08
MCM4P33991 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
MCM4P33991 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
MCM4P33991 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
MCM4P33991 CALM3-209ENST00000597743 577 ntTSL 4 BASIC28.03■■■□□ 2.08
MCM4P33991 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC28.03■■■□□ 2.08
MCM4P33991 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
MCM4P33991 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
MCM4P33991 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC28.02■■■□□ 2.08
MCM4P33991 MACF1-219ENST00000484793 834 ntTSL 2 BASIC28.02■■■□□ 2.08
MCM4P33991 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.08
MCM4P33991 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC28.01■■■□□ 2.07
MCM4P33991 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
MCM4P33991 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC28.01■■■□□ 2.07
MCM4P33991 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
MCM4P33991 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC28.01■■■□□ 2.07
MCM4P33991 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
MCM4P33991 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
MCM4P33991 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC28■■■□□ 2.07
MCM4P33991 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC28■■■□□ 2.07
MCM4P33991 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC28■■■□□ 2.07
MCM4P33991 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC28■■■□□ 2.07
MCM4P33991 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC28■■■□□ 2.07
MCM4P33991 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC28■■■□□ 2.07
MCM4P33991 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC27.99■■■□□ 2.07
MCM4P33991 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC27.99■■■□□ 2.07
MCM4P33991 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC27.99■■■□□ 2.07
MCM4P33991 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC27.99■■■□□ 2.07
MCM4P33991 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC27.99■■■□□ 2.07
MCM4P33991 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC27.99■■■□□ 2.07
MCM4P33991 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC27.99■■■□□ 2.07
MCM4P33991 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC27.99■■■□□ 2.07
MCM4P33991 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
MCM4P33991 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC27.98■■■□□ 2.07
MCM4P33991 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC27.98■■■□□ 2.07
MCM4P33991 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
MCM4P33991 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC27.98■■■□□ 2.07
MCM4P33991 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC27.98■■■□□ 2.07
MCM4P33991 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
MCM4P33991 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
MCM4P33991 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC27.98■■■□□ 2.07
MCM4P33991 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
MCM4P33991 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
MCM4P33991 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
MCM4P33991 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC27.97■■■□□ 2.07
MCM4P33991 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC27.97■■■□□ 2.07
MCM4P33991 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
MCM4P33991 RPS2-202ENST00000526522 924 ntTSL 2 BASIC27.96■■■□□ 2.07
MCM4P33991 GDI1-215ENST00000630693 786 ntTSL 4 BASIC27.96■■■□□ 2.07
MCM4P33991 DUSP8P5-201ENST00000422884 1815 ntBASIC27.96■■■□□ 2.07
MCM4P33991 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC27.96■■■□□ 2.07
MCM4P33991 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
MCM4P33991 CLDN5-201ENST00000403084 2357 ntBASIC27.95■■■□□ 2.07
MCM4P33991 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
MCM4P33991 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
MCM4P33991 MIR3648-2-201ENST00000581792 180 ntBASIC27.95■■■□□ 2.06
MCM4P33991 MIR3648-1-201ENST00000615959 180 ntBASIC27.95■■■□□ 2.06
MCM4P33991 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC27.95■■■□□ 2.06
MCM4P33991 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
MCM4P33991 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
MCM4P33991 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
MCM4P33991 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
MCM4P33991 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
MCM4P33991 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
MCM4P33991 AGPS-202ENST00000409888 815 ntTSL 4 BASIC27.94■■■□□ 2.06
MCM4P33991 AC016575.1-201ENST00000607026 382 ntBASIC27.94■■■□□ 2.06
MCM4P33991 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC27.93■■■□□ 2.06
MCM4P33991 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
MCM4P33991 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC27.93■■■□□ 2.06
MCM4P33991 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC27.93■■■□□ 2.06
MCM4P33991 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC27.93■■■□□ 2.06
MCM4P33991 CR559946.2-201ENST00000623684 991 ntBASIC27.93■■■□□ 2.06
MCM4P33991 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
MCM4P33991 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC27.93■■■□□ 2.06
MCM4P33991 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC27.93■■■□□ 2.06
MCM4P33991 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC27.93■■■□□ 2.06
MCM4P33991 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms