Protein–RNA interactions for Protein: P31040

SDHA, Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP31040 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
SDHAP31040 AC022413.1-201ENST00000624602 984 ntBASIC21.38■■□□□ 1.01
SDHAP31040 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SDHAP31040 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SDHAP31040 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SDHAP31040 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SDHAP31040 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.37■■□□□ 1.01
SDHAP31040 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.37■■□□□ 1.01
SDHAP31040 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SDHAP31040 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SDHAP31040 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.36■■□□□ 1.01
SDHAP31040 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SDHAP31040 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
SDHAP31040 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.36■■□□□ 1.01
SDHAP31040 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.36■■□□□ 1.01
SDHAP31040 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SDHAP31040 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SDHAP31040 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.36■■□□□ 1.01
SDHAP31040 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
SDHAP31040 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.34■■□□□ 1.01
SDHAP31040 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
SDHAP31040 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SDHAP31040 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SDHAP31040 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.34■■□□□ 1.01
SDHAP31040 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SDHAP31040 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.34■■□□□ 1.01
SDHAP31040 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SDHAP31040 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
SDHAP31040 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SDHAP31040 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SDHAP31040 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
SDHAP31040 RP9P-202ENST00000450133 1212 ntBASIC21.33■■□□□ 1.01
SDHAP31040 CEP120-209ENST00000515110 606 ntTSL 3 BASIC21.33■■□□□ 1.01
SDHAP31040 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
SDHAP31040 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
SDHAP31040 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.32■■□□□ 1
SDHAP31040 SLC6A10P-202ENST00000431994 2058 ntBASIC21.32■■□□□ 1
SDHAP31040 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
SDHAP31040 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.32■■□□□ 1
SDHAP31040 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SDHAP31040 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.32■■□□□ 1
SDHAP31040 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SDHAP31040 AL139125.2-201ENST00000623134 1869 ntBASIC21.32■■□□□ 1
SDHAP31040 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.31■■□□□ 1
SDHAP31040 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SDHAP31040 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.31■■□□□ 1
SDHAP31040 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SDHAP31040 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SDHAP31040 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SDHAP31040 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SDHAP31040 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
SDHAP31040 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.3■■□□□ 1
SDHAP31040 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.3■■□□□ 1
SDHAP31040 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SDHAP31040 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
SDHAP31040 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
SDHAP31040 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
SDHAP31040 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SDHAP31040 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
SDHAP31040 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
SDHAP31040 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.29■■□□□ 1
SDHAP31040 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SDHAP31040 AP003733.4-201ENST00000623785 1697 ntBASIC21.29■■□□□ 1
SDHAP31040 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.29■■□□□ 1
SDHAP31040 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SDHAP31040 MIR4449-201ENST00000578365 66 ntBASIC21.29■■□□□ 1
SDHAP31040 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.29■■□□□ 1
SDHAP31040 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SDHAP31040 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.28■■□□□ 1
SDHAP31040 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SDHAP31040 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SDHAP31040 AC093536.1-201ENST00000569153 554 ntBASIC21.28■■□□□ 1
SDHAP31040 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
SDHAP31040 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SDHAP31040 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SDHAP31040 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.28■■□□□ 1
SDHAP31040 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.28■■□□□ 1
SDHAP31040 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.28■■□□□ 1
SDHAP31040 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
SDHAP31040 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
SDHAP31040 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
SDHAP31040 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
SDHAP31040 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.27■□□□□ 0.99
SDHAP31040 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
SDHAP31040 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.26■□□□□ 0.99
SDHAP31040 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.26■□□□□ 0.99
SDHAP31040 AC007029.1-201ENST00000604183 313 ntBASIC21.26■□□□□ 0.99
SDHAP31040 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.26■□□□□ 0.99
SDHAP31040 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.25■□□□□ 0.99
SDHAP31040 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.25■□□□□ 0.99
SDHAP31040 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SDHAP31040 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SDHAP31040 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SDHAP31040 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC21.25■□□□□ 0.99
SDHAP31040 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
SDHAP31040 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.25■□□□□ 0.99
SDHAP31040 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
SDHAP31040 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.25■□□□□ 0.99
SDHAP31040 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SDHAP31040 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms